Protein–RNA interactions for Protein: Q7RTS3

PTF1A, Pancreas transcription factor 1 subunit alpha, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1AQ7RTS3 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PTF1AQ7RTS3 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTF1AQ7RTS3 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC18.69■□□□□ 0.58
PTF1AQ7RTS3 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PTF1AQ7RTS3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTF1AQ7RTS3 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC18.69■□□□□ 0.58
PTF1AQ7RTS3 BPIFB5P-201ENST00000457066 1099 ntBASIC18.69■□□□□ 0.58
PTF1AQ7RTS3 AC006529.1-201ENST00000459978 637 ntBASIC18.69■□□□□ 0.58
PTF1AQ7RTS3 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC18.69■□□□□ 0.58
PTF1AQ7RTS3 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC18.69■□□□□ 0.58
PTF1AQ7RTS3 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTF1AQ7RTS3 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC18.69■□□□□ 0.58
PTF1AQ7RTS3 AC090136.2-201ENST00000517809 420 ntBASIC18.69■□□□□ 0.58
PTF1AQ7RTS3 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC18.69■□□□□ 0.58
PTF1AQ7RTS3 AC023968.2-201ENST00000560593 1049 ntBASIC18.69■□□□□ 0.58
PTF1AQ7RTS3 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC18.69■□□□□ 0.58
PTF1AQ7RTS3 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC18.69■□□□□ 0.58
PTF1AQ7RTS3 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTF1AQ7RTS3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTF1AQ7RTS3 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTF1AQ7RTS3 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTF1AQ7RTS3 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.69■□□□□ 0.58
PTF1AQ7RTS3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC18.69■□□□□ 0.58
PTF1AQ7RTS3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
PTF1AQ7RTS3 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
PTF1AQ7RTS3 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC18.69■□□□□ 0.58
PTF1AQ7RTS3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTF1AQ7RTS3 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PTF1AQ7RTS3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
PTF1AQ7RTS3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.68■□□□□ 0.58
PTF1AQ7RTS3 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.68■□□□□ 0.58
PTF1AQ7RTS3 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTF1AQ7RTS3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC18.68■□□□□ 0.58
PTF1AQ7RTS3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTF1AQ7RTS3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.68■□□□□ 0.58
PTF1AQ7RTS3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTF1AQ7RTS3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PTF1AQ7RTS3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTF1AQ7RTS3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTF1AQ7RTS3 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC18.68■□□□□ 0.58
PTF1AQ7RTS3 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PTF1AQ7RTS3 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTF1AQ7RTS3 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC18.68■□□□□ 0.58
PTF1AQ7RTS3 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTF1AQ7RTS3 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC18.68■□□□□ 0.58
PTF1AQ7RTS3 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC18.68■□□□□ 0.58
PTF1AQ7RTS3 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC18.68■□□□□ 0.58
PTF1AQ7RTS3 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC18.68■□□□□ 0.58
PTF1AQ7RTS3 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC18.68■□□□□ 0.58
PTF1AQ7RTS3 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC18.68■□□□□ 0.58
PTF1AQ7RTS3 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC18.68■□□□□ 0.58
PTF1AQ7RTS3 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC18.68■□□□□ 0.58
PTF1AQ7RTS3 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTF1AQ7RTS3 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTF1AQ7RTS3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.68■□□□□ 0.58
PTF1AQ7RTS3 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTF1AQ7RTS3 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTF1AQ7RTS3 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTF1AQ7RTS3 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.68■□□□□ 0.58
PTF1AQ7RTS3 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.68■□□□□ 0.58
PTF1AQ7RTS3 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTF1AQ7RTS3 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTF1AQ7RTS3 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTF1AQ7RTS3 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PTF1AQ7RTS3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTF1AQ7RTS3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PTF1AQ7RTS3 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTF1AQ7RTS3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PTF1AQ7RTS3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTF1AQ7RTS3 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTF1AQ7RTS3 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.67■□□□□ 0.58
PTF1AQ7RTS3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PTF1AQ7RTS3 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTF1AQ7RTS3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTF1AQ7RTS3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTF1AQ7RTS3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.67■□□□□ 0.58
PTF1AQ7RTS3 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC18.67■□□□□ 0.58
PTF1AQ7RTS3 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC18.67■□□□□ 0.58
PTF1AQ7RTS3 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC18.67■□□□□ 0.58
PTF1AQ7RTS3 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTF1AQ7RTS3 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTF1AQ7RTS3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTF1AQ7RTS3 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PTF1AQ7RTS3 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PTF1AQ7RTS3 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC18.67■□□□□ 0.58
PTF1AQ7RTS3 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.67■□□□□ 0.58
PTF1AQ7RTS3 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PTF1AQ7RTS3 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC18.67■□□□□ 0.58
PTF1AQ7RTS3 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC18.67■□□□□ 0.58
PTF1AQ7RTS3 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC18.67■□□□□ 0.58
PTF1AQ7RTS3 ALG1L3P-201ENST00000503331 765 ntBASIC18.67■□□□□ 0.58
PTF1AQ7RTS3 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC18.67■□□□□ 0.58
PTF1AQ7RTS3 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTF1AQ7RTS3 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
PTF1AQ7RTS3 AL133467.4-201ENST00000602953 725 ntBASIC18.67■□□□□ 0.58
PTF1AQ7RTS3 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC18.67■□□□□ 0.58
PTF1AQ7RTS3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTF1AQ7RTS3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.67■□□□□ 0.58
PTF1AQ7RTS3 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.67■□□□□ 0.58
PTF1AQ7RTS3 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms