Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RFX7Q2KHR2 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFX7Q2KHR2 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.88■□□□□ 0.45
RFX7Q2KHR2 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RFX7Q2KHR2 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.88■□□□□ 0.45
RFX7Q2KHR2 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFX7Q2KHR2 MYADML-201ENST00000474610 2147 ntBASIC17.88■□□□□ 0.45
RFX7Q2KHR2 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
RFX7Q2KHR2 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFX7Q2KHR2 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RFX7Q2KHR2 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFX7Q2KHR2 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RFX7Q2KHR2 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC17.88■□□□□ 0.45
RFX7Q2KHR2 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RFX7Q2KHR2 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.88■□□□□ 0.45
RFX7Q2KHR2 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFX7Q2KHR2 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RFX7Q2KHR2 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFX7Q2KHR2 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RFX7Q2KHR2 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC17.88■□□□□ 0.45
RFX7Q2KHR2 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RFX7Q2KHR2 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC17.88■□□□□ 0.45
RFX7Q2KHR2 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC17.88■□□□□ 0.45
RFX7Q2KHR2 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.88■□□□□ 0.45
RFX7Q2KHR2 MIR6074-201ENST00000612054 107 ntBASIC17.88■□□□□ 0.45
RFX7Q2KHR2 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RFX7Q2KHR2 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC17.88■□□□□ 0.45
RFX7Q2KHR2 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFX7Q2KHR2 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFX7Q2KHR2 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RFX7Q2KHR2 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFX7Q2KHR2 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.88■□□□□ 0.45
RFX7Q2KHR2 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFX7Q2KHR2 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.88■□□□□ 0.45
RFX7Q2KHR2 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC17.88■□□□□ 0.45
RFX7Q2KHR2 F10-203ENST00000409306 1450 ntTSL 3 BASIC17.87■□□□□ 0.45
RFX7Q2KHR2 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RFX7Q2KHR2 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFX7Q2KHR2 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFX7Q2KHR2 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFX7Q2KHR2 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC17.87■□□□□ 0.45
RFX7Q2KHR2 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
RFX7Q2KHR2 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFX7Q2KHR2 AC007191.1-201ENST00000623179 2995 ntBASIC17.87■□□□□ 0.45
RFX7Q2KHR2 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFX7Q2KHR2 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFX7Q2KHR2 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFX7Q2KHR2 CYP46A4P-201ENST00000414953 267 ntBASIC17.87■□□□□ 0.45
RFX7Q2KHR2 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.87■□□□□ 0.45
RFX7Q2KHR2 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RFX7Q2KHR2 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC17.87■□□□□ 0.45
RFX7Q2KHR2 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFX7Q2KHR2 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.87■□□□□ 0.45
RFX7Q2KHR2 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.87■□□□□ 0.45
RFX7Q2KHR2 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.87■□□□□ 0.45
RFX7Q2KHR2 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
RFX7Q2KHR2 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.87■□□□□ 0.45
RFX7Q2KHR2 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.87■□□□□ 0.45
RFX7Q2KHR2 AC005324.6-201ENST00000587972 613 ntBASIC17.87■□□□□ 0.45
RFX7Q2KHR2 MVK-217ENST00000639206 367 ntTSL 5 BASIC17.87■□□□□ 0.45
RFX7Q2KHR2 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFX7Q2KHR2 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFX7Q2KHR2 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.87■□□□□ 0.45
RFX7Q2KHR2 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RFX7Q2KHR2 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.87■□□□□ 0.45
RFX7Q2KHR2 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.86■□□□□ 0.45
RFX7Q2KHR2 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC17.86■□□□□ 0.45
RFX7Q2KHR2 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC17.86■□□□□ 0.45
RFX7Q2KHR2 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
RFX7Q2KHR2 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFX7Q2KHR2 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFX7Q2KHR2 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC17.86■□□□□ 0.45
RFX7Q2KHR2 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RFX7Q2KHR2 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
RFX7Q2KHR2 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFX7Q2KHR2 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
RFX7Q2KHR2 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.86■□□□□ 0.45
RFX7Q2KHR2 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFX7Q2KHR2 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RFX7Q2KHR2 NPPA-201ENST00000376476 728 ntTSL 3 BASIC17.86■□□□□ 0.45
RFX7Q2KHR2 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC17.86■□□□□ 0.45
RFX7Q2KHR2 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.86■□□□□ 0.45
RFX7Q2KHR2 EIF4HP1-201ENST00000453115 687 ntBASIC17.86■□□□□ 0.45
RFX7Q2KHR2 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RFX7Q2KHR2 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.86■□□□□ 0.45
RFX7Q2KHR2 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC17.86■□□□□ 0.45
RFX7Q2KHR2 AC132192.2-201ENST00000596206 1147 ntBASIC17.86■□□□□ 0.45
RFX7Q2KHR2 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.86■□□□□ 0.45
RFX7Q2KHR2 AP001505.2-201ENST00000616815 443 ntBASIC17.86■□□□□ 0.45
RFX7Q2KHR2 AL023803.2-201ENST00000620080 638 ntBASIC17.86■□□□□ 0.45
RFX7Q2KHR2 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.86■□□□□ 0.45
RFX7Q2KHR2 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.86■□□□□ 0.45
RFX7Q2KHR2 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC17.86■□□□□ 0.45
RFX7Q2KHR2 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFX7Q2KHR2 AC005912.2-201ENST00000619492 2400 ntBASIC17.86■□□□□ 0.45
RFX7Q2KHR2 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFX7Q2KHR2 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RFX7Q2KHR2 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC17.85■□□□□ 0.45
RFX7Q2KHR2 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFX7Q2KHR2 SHC1P1-201ENST00000425230 1745 ntBASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms