Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.96□□□□□ -0.17
CD47Q08722 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
CD47Q08722 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CD47Q08722 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CD47Q08722 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.96□□□□□ -0.17
CD47Q08722 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
CD47Q08722 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CD47Q08722 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CD47Q08722 KRT8P22-201ENST00000562317 1415 ntBASIC13.96□□□□□ -0.18
CD47Q08722 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
CD47Q08722 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.96□□□□□ -0.18
CD47Q08722 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
CD47Q08722 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
CD47Q08722 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CD47Q08722 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
CD47Q08722 LILRP1-201ENST00000444199 1370 ntBASIC13.96□□□□□ -0.18
CD47Q08722 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CD47Q08722 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD47Q08722 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.95□□□□□ -0.18
CD47Q08722 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.95□□□□□ -0.18
CD47Q08722 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.95□□□□□ -0.18
CD47Q08722 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD47Q08722 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.95□□□□□ -0.18
CD47Q08722 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD47Q08722 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD47Q08722 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD47Q08722 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD47Q08722 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CD47Q08722 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.95□□□□□ -0.18
CD47Q08722 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
CD47Q08722 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CD47Q08722 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CD47Q08722 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD47Q08722 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.95□□□□□ -0.18
CD47Q08722 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.95□□□□□ -0.18
CD47Q08722 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.95□□□□□ -0.18
CD47Q08722 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.95□□□□□ -0.18
CD47Q08722 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.95□□□□□ -0.18
CD47Q08722 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.95□□□□□ -0.18
CD47Q08722 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.95□□□□□ -0.18
CD47Q08722 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
CD47Q08722 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.95□□□□□ -0.18
CD47Q08722 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.95□□□□□ -0.18
CD47Q08722 TEX28P1-201ENST00000613479 1221 ntBASIC13.95□□□□□ -0.18
CD47Q08722 TEX28P2-201ENST00000617764 1221 ntBASIC13.95□□□□□ -0.18
CD47Q08722 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD47Q08722 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD47Q08722 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CD47Q08722 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CD47Q08722 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CD47Q08722 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CD47Q08722 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD47Q08722 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD47Q08722 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
CD47Q08722 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD47Q08722 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD47Q08722 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD47Q08722 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CD47Q08722 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CD47Q08722 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CD47Q08722 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.95□□□□□ -0.18
CD47Q08722 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD47Q08722 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD47Q08722 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CD47Q08722 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD47Q08722 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD47Q08722 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD47Q08722 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CD47Q08722 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.94□□□□□ -0.18
CD47Q08722 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CD47Q08722 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD47Q08722 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD47Q08722 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.94□□□□□ -0.18
CD47Q08722 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CD47Q08722 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD47Q08722 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD47Q08722 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD47Q08722 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD47Q08722 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD47Q08722 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.94□□□□□ -0.18
CD47Q08722 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CD47Q08722 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CD47Q08722 NUTM2HP-201ENST00000442076 2498 ntBASIC13.94□□□□□ -0.18
CD47Q08722 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.94□□□□□ -0.18
CD47Q08722 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.94□□□□□ -0.18
CD47Q08722 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.94□□□□□ -0.18
CD47Q08722 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.94□□□□□ -0.18
CD47Q08722 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.94□□□□□ -0.18
CD47Q08722 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD47Q08722 AC027369.6-201ENST00000525520 931 ntBASIC13.94□□□□□ -0.18
CD47Q08722 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CD47Q08722 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.94□□□□□ -0.18
CD47Q08722 AC140878.1-201ENST00000565277 250 ntBASIC13.94□□□□□ -0.18
CD47Q08722 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD47Q08722 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.94□□□□□ -0.18
CD47Q08722 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.94□□□□□ -0.18
CD47Q08722 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD47Q08722 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.94□□□□□ -0.18
CD47Q08722 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.94□□□□□ -0.18
CD47Q08722 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms