Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC025048.6-201ENST00000634326 1161 ntBASIC14.43□□□□□ -0.1
PCDH1Q08174 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.43□□□□□ -0.1
PCDH1Q08174 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDH1Q08174 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.43□□□□□ -0.1
PCDH1Q08174 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDH1Q08174 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
PCDH1Q08174 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCDH1Q08174 MSTO2P-201ENST00000314835 1709 ntBASIC14.43□□□□□ -0.1
PCDH1Q08174 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDH1Q08174 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCDH1Q08174 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDH1Q08174 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDH1Q08174 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
PCDH1Q08174 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
PCDH1Q08174 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDH1Q08174 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.43□□□□□ -0.1
PCDH1Q08174 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCDH1Q08174 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
PCDH1Q08174 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDH1Q08174 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
PCDH1Q08174 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PCDH1Q08174 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDH1Q08174 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDH1Q08174 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDH1Q08174 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
PCDH1Q08174 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDH1Q08174 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCDH1Q08174 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.42□□□□□ -0.1
PCDH1Q08174 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCDH1Q08174 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
PCDH1Q08174 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDH1Q08174 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDH1Q08174 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDH1Q08174 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.42□□□□□ -0.1
PCDH1Q08174 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PCDH1Q08174 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCDH1Q08174 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDH1Q08174 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDH1Q08174 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDH1Q08174 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDH1Q08174 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PCDH1Q08174 AC005229.1-201ENST00000392885 409 ntBASIC14.42□□□□□ -0.1
PCDH1Q08174 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
PCDH1Q08174 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.42□□□□□ -0.1
PCDH1Q08174 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.42□□□□□ -0.1
PCDH1Q08174 FO681548.1-201ENST00000455617 1132 ntBASIC14.42□□□□□ -0.1
PCDH1Q08174 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.42□□□□□ -0.1
PCDH1Q08174 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCDH1Q08174 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.42□□□□□ -0.1
PCDH1Q08174 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PCDH1Q08174 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
PCDH1Q08174 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
PCDH1Q08174 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCDH1Q08174 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.42□□□□□ -0.1
PCDH1Q08174 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.42□□□□□ -0.1
PCDH1Q08174 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.42□□□□□ -0.1
PCDH1Q08174 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCDH1Q08174 AC010319.3-201ENST00000597028 470 ntBASIC14.42□□□□□ -0.1
PCDH1Q08174 LINC02084-201ENST00000606069 1096 ntBASIC14.42□□□□□ -0.1
PCDH1Q08174 ENPP7P14-201ENST00000621765 1040 ntBASIC14.42□□□□□ -0.1
PCDH1Q08174 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCDH1Q08174 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCDH1Q08174 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
PCDH1Q08174 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
PCDH1Q08174 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDH1Q08174 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDH1Q08174 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCDH1Q08174 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
PCDH1Q08174 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDH1Q08174 AP001267.2-201ENST00000532619 2086 ntBASIC14.42□□□□□ -0.1
PCDH1Q08174 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
PCDH1Q08174 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH1Q08174 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH1Q08174 CLUHP2-201ENST00000426660 1303 ntBASIC14.41□□□□□ -0.1
PCDH1Q08174 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
PCDH1Q08174 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH1Q08174 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH1Q08174 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH1Q08174 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
PCDH1Q08174 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH1Q08174 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH1Q08174 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH1Q08174 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
PCDH1Q08174 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PCDH1Q08174 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH1Q08174 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
PCDH1Q08174 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
PCDH1Q08174 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.41□□□□□ -0.1
PCDH1Q08174 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH1Q08174 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
PCDH1Q08174 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH1Q08174 CICP4-201ENST00000447359 2812 ntBASIC14.41□□□□□ -0.1
PCDH1Q08174 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
PCDH1Q08174 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH1Q08174 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.41□□□□□ -0.1
PCDH1Q08174 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
PCDH1Q08174 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH1Q08174 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH1Q08174 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
PCDH1Q08174 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms