Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 CHCHD2P9-201ENST00000461726 456 ntBASIC16.84■□□□□ 0.29
CCNA1P78396 CFL1-206ENST00000527344 962 ntTSL 2 BASIC16.84■□□□□ 0.29
CCNA1P78396 FOS-204ENST00000554617 796 ntTSL 2 BASIC16.84■□□□□ 0.29
CCNA1P78396 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC16.84■□□□□ 0.29
CCNA1P78396 AP001065.2-201ENST00000617205 644 ntBASIC16.84■□□□□ 0.29
CCNA1P78396 YRDCP1-201ENST00000621419 643 ntBASIC16.84■□□□□ 0.29
CCNA1P78396 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.84■□□□□ 0.29
CCNA1P78396 AC092299.1-201ENST00000632679 757 ntBASIC16.84■□□□□ 0.29
CCNA1P78396 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCNA1P78396 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCNA1P78396 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCNA1P78396 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCNA1P78396 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CCNA1P78396 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCNA1P78396 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC16.84■□□□□ 0.29
CCNA1P78396 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCNA1P78396 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCNA1P78396 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCNA1P78396 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.84■□□□□ 0.29
CCNA1P78396 AC023024.2-201ENST00000623561 1993 ntBASIC16.84■□□□□ 0.29
CCNA1P78396 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.84■□□□□ 0.29
CCNA1P78396 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCNA1P78396 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCNA1P78396 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCNA1P78396 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCNA1P78396 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
CCNA1P78396 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNA1P78396 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNA1P78396 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNA1P78396 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCNA1P78396 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCNA1P78396 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CCNA1P78396 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CCNA1P78396 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC16.83■□□□□ 0.28
CCNA1P78396 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CCNA1P78396 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNA1P78396 AL512430.1-201ENST00000392575 860 ntBASIC16.83■□□□□ 0.28
CCNA1P78396 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC16.83■□□□□ 0.28
CCNA1P78396 BANF1P3-201ENST00000412556 261 ntBASIC16.83■□□□□ 0.28
CCNA1P78396 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC16.83■□□□□ 0.28
CCNA1P78396 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC16.83■□□□□ 0.28
CCNA1P78396 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNA1P78396 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCNA1P78396 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC16.83■□□□□ 0.28
CCNA1P78396 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC16.83■□□□□ 0.28
CCNA1P78396 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCNA1P78396 DUTP3-201ENST00000450025 415 ntBASIC16.83■□□□□ 0.28
CCNA1P78396 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC16.83■□□□□ 0.28
CCNA1P78396 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCNA1P78396 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNA1P78396 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.83■□□□□ 0.28
CCNA1P78396 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCNA1P78396 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
CCNA1P78396 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC16.83■□□□□ 0.28
CCNA1P78396 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.83■□□□□ 0.28
CCNA1P78396 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNA1P78396 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCNA1P78396 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNA1P78396 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
CCNA1P78396 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC16.83■□□□□ 0.28
CCNA1P78396 WT1-AS_6.1-201ENST00000614919 121 ntBASIC16.83■□□□□ 0.28
CCNA1P78396 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.83■□□□□ 0.28
CCNA1P78396 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC16.83■□□□□ 0.28
CCNA1P78396 HLA-C-210ENST00000640219 976 ntBASIC16.83■□□□□ 0.28
CCNA1P78396 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNA1P78396 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CCNA1P78396 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.83■□□□□ 0.28
CCNA1P78396 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CCNA1P78396 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNA1P78396 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNA1P78396 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.83■□□□□ 0.28
CCNA1P78396 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNA1P78396 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNA1P78396 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNA1P78396 REXO1L2P-201ENST00000425429 2069 ntBASIC16.82■□□□□ 0.28
CCNA1P78396 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNA1P78396 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CCNA1P78396 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.82■□□□□ 0.28
CCNA1P78396 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.82■□□□□ 0.28
CCNA1P78396 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CCNA1P78396 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNA1P78396 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.82■□□□□ 0.28
CCNA1P78396 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.82■□□□□ 0.28
CCNA1P78396 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.82■□□□□ 0.28
CCNA1P78396 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.82■□□□□ 0.28
CCNA1P78396 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CCNA1P78396 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNA1P78396 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CCNA1P78396 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CCNA1P78396 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC16.82■□□□□ 0.28
CCNA1P78396 AL355334.1-201ENST00000417713 215 ntBASIC16.82■□□□□ 0.28
CCNA1P78396 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.82■□□□□ 0.28
CCNA1P78396 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC16.82■□□□□ 0.28
CCNA1P78396 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC16.82■□□□□ 0.28
CCNA1P78396 RPSAP15-201ENST00000448168 861 ntBASIC16.82■□□□□ 0.28
CCNA1P78396 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCNA1P78396 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC16.82■□□□□ 0.28
CCNA1P78396 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNA1P78396 AC087392.5-201ENST00000612517 489 ntBASIC16.82■□□□□ 0.28
CCNA1P78396 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms