Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNTNAP1P78357 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNTNAP1P78357 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CNTNAP1P78357 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CNTNAP1P78357 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CNTNAP1P78357 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CNTNAP1P78357 HNRNPA1P27-201ENST00000412087 955 ntBASIC17.45■□□□□ 0.38
CNTNAP1P78357 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC17.45■□□□□ 0.38
CNTNAP1P78357 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CNTNAP1P78357 RN7SL494P-201ENST00000461517 304 ntBASIC17.45■□□□□ 0.38
CNTNAP1P78357 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC17.45■□□□□ 0.38
CNTNAP1P78357 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.45■□□□□ 0.38
CNTNAP1P78357 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CNTNAP1P78357 ELP5-212ENST00000574255 671 ntTSL 2 BASIC17.45■□□□□ 0.38
CNTNAP1P78357 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC17.45■□□□□ 0.38
CNTNAP1P78357 AL353622.2-201ENST00000605846 425 ntBASIC17.45■□□□□ 0.38
CNTNAP1P78357 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CNTNAP1P78357 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNTNAP1P78357 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CNTNAP1P78357 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNTNAP1P78357 TMBIM7P-203ENST00000641617 1718 ntBASIC17.45■□□□□ 0.38
CNTNAP1P78357 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNTNAP1P78357 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
CNTNAP1P78357 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNTNAP1P78357 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC17.45■□□□□ 0.38
CNTNAP1P78357 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNTNAP1P78357 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.45■□□□□ 0.38
CNTNAP1P78357 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC17.45■□□□□ 0.38
CNTNAP1P78357 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.45■□□□□ 0.38
CNTNAP1P78357 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC17.45■□□□□ 0.38
CNTNAP1P78357 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP1P78357 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC17.44■□□□□ 0.38
CNTNAP1P78357 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CNTNAP1P78357 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.44■□□□□ 0.38
CNTNAP1P78357 PCDHGB8P-201ENST00000502926 1973 ntBASIC17.44■□□□□ 0.38
CNTNAP1P78357 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP1P78357 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.44■□□□□ 0.38
CNTNAP1P78357 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP1P78357 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.44■□□□□ 0.38
CNTNAP1P78357 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP1P78357 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP1P78357 MIR566-201ENST00000385187 94 ntBASIC17.44■□□□□ 0.38
CNTNAP1P78357 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CNTNAP1P78357 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP1P78357 OR2R1P-201ENST00000441404 914 ntBASIC17.44■□□□□ 0.38
CNTNAP1P78357 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC17.44■□□□□ 0.38
CNTNAP1P78357 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC17.44■□□□□ 0.38
CNTNAP1P78357 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC17.44■□□□□ 0.38
CNTNAP1P78357 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP1P78357 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC17.44■□□□□ 0.38
CNTNAP1P78357 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC17.44■□□□□ 0.38
CNTNAP1P78357 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP1P78357 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC17.44■□□□□ 0.38
CNTNAP1P78357 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP1P78357 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC17.44■□□□□ 0.38
CNTNAP1P78357 MVK-217ENST00000639206 367 ntTSL 5 BASIC17.44■□□□□ 0.38
CNTNAP1P78357 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP1P78357 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP1P78357 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP1P78357 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP1P78357 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP1P78357 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC17.44■□□□□ 0.38
CNTNAP1P78357 KRT8P28-201ENST00000433288 1390 ntBASIC17.44■□□□□ 0.38
CNTNAP1P78357 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP1P78357 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CNTNAP1P78357 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP1P78357 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.44■□□□□ 0.38
CNTNAP1P78357 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.44■□□□□ 0.38
CNTNAP1P78357 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP1P78357 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC17.44■□□□□ 0.38
CNTNAP1P78357 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP1P78357 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.43■□□□□ 0.38
CNTNAP1P78357 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP1P78357 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP1P78357 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP1P78357 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.43■□□□□ 0.38
CNTNAP1P78357 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP1P78357 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC17.43■□□□□ 0.38
CNTNAP1P78357 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC17.43■□□□□ 0.38
CNTNAP1P78357 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC17.43■□□□□ 0.38
CNTNAP1P78357 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC17.43■□□□□ 0.38
CNTNAP1P78357 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC17.43■□□□□ 0.38
CNTNAP1P78357 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP1P78357 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP1P78357 AC083801.1-201ENST00000491689 358 ntBASIC17.43■□□□□ 0.38
CNTNAP1P78357 CISD2-202ENST00000503643 808 ntTSL 2 BASIC17.43■□□□□ 0.38
CNTNAP1P78357 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC17.43■□□□□ 0.38
CNTNAP1P78357 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
CNTNAP1P78357 EMC4-208ENST00000559078 599 ntTSL 3 BASIC17.43■□□□□ 0.38
CNTNAP1P78357 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP1P78357 MIR3188-201ENST00000583494 85 ntBASIC17.43■□□□□ 0.38
CNTNAP1P78357 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP1P78357 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP1P78357 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP1P78357 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP1P78357 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP1P78357 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CNTNAP1P78357 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP1P78357 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC17.43■□□□□ 0.38
CNTNAP1P78357 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms