Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
GABREP78334 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.18□□□□□ -0.14
GABREP78334 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.18□□□□□ -0.14
GABREP78334 AC092127.1-201ENST00000567093 3455 ntBASIC14.18□□□□□ -0.14
GABREP78334 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.18□□□□□ -0.14
GABREP78334 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
GABREP78334 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GABREP78334 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
GABREP78334 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GABREP78334 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GABREP78334 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.18□□□□□ -0.14
GABREP78334 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.18□□□□□ -0.14
GABREP78334 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GABREP78334 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GABREP78334 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.17□□□□□ -0.14
GABREP78334 AC244394.1-201ENST00000435000 1665 ntBASIC14.17□□□□□ -0.14
GABREP78334 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
GABREP78334 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GABREP78334 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.17□□□□□ -0.14
GABREP78334 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GABREP78334 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GABREP78334 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GABREP78334 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GABREP78334 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GABREP78334 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GABREP78334 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GABREP78334 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GABREP78334 AC239868.1-201ENST00000369385 493 ntBASIC14.17□□□□□ -0.14
GABREP78334 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14.17□□□□□ -0.14
GABREP78334 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GABREP78334 AC079112.1-201ENST00000454972 939 ntBASIC14.17□□□□□ -0.14
GABREP78334 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.17□□□□□ -0.14
GABREP78334 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.17□□□□□ -0.14
GABREP78334 AC009884.2-201ENST00000603110 324 ntBASIC14.17□□□□□ -0.14
GABREP78334 AC103810.10-201ENST00000606504 343 ntBASIC14.17□□□□□ -0.14
GABREP78334 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.17□□□□□ -0.14
GABREP78334 AP001065.2-201ENST00000617205 644 ntBASIC14.17□□□□□ -0.14
GABREP78334 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.17□□□□□ -0.14
GABREP78334 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GABREP78334 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.17□□□□□ -0.14
GABREP78334 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GABREP78334 AC126755.1-201ENST00000525846 6405 ntBASIC14.17□□□□□ -0.14
GABREP78334 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GABREP78334 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GABREP78334 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GABREP78334 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GABREP78334 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GABREP78334 AC092850.2-201ENST00000623821 2697 ntBASIC14.17□□□□□ -0.14
GABREP78334 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
GABREP78334 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GABREP78334 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.17□□□□□ -0.14
GABREP78334 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GABREP78334 AC074138.1-201ENST00000611182 1303 ntBASIC14.16□□□□□ -0.14
GABREP78334 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.16□□□□□ -0.14
GABREP78334 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GABREP78334 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GABREP78334 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
GABREP78334 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
GABREP78334 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.16□□□□□ -0.14
GABREP78334 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
GABREP78334 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GABREP78334 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.16□□□□□ -0.14
GABREP78334 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GABREP78334 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
GABREP78334 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
GABREP78334 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GABREP78334 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.16□□□□□ -0.14
GABREP78334 RPS9P1-201ENST00000419943 583 ntBASIC14.16□□□□□ -0.14
GABREP78334 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.16□□□□□ -0.14
GABREP78334 KLF2P1-201ENST00000447438 1042 ntBASIC14.16□□□□□ -0.14
GABREP78334 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
GABREP78334 SCARNA21-201ENST00000517026 139 ntBASIC14.16□□□□□ -0.14
GABREP78334 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.16□□□□□ -0.14
GABREP78334 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
GABREP78334 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.16□□□□□ -0.14
GABREP78334 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
GABREP78334 AC005962.1-201ENST00000584100 773 ntBASIC14.16□□□□□ -0.14
GABREP78334 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC14.16□□□□□ -0.14
GABREP78334 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GABREP78334 AC007718.1-201ENST00000621078 280 ntBASIC14.16□□□□□ -0.14
GABREP78334 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.16□□□□□ -0.14
GABREP78334 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GABREP78334 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GABREP78334 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GABREP78334 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.16□□□□□ -0.14
GABREP78334 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GABREP78334 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GABREP78334 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
GABREP78334 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
GABREP78334 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.16□□□□□ -0.14
GABREP78334 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GABREP78334 AL137783.1-201ENST00000623494 1896 ntBASIC14.16□□□□□ -0.14
GABREP78334 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GABREP78334 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.16□□□□□ -0.14
GABREP78334 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GABREP78334 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.16□□□□□ -0.14
GABREP78334 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
GABREP78334 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GABREP78334 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GABREP78334 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms