Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
VBP1P61758 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
VBP1P61758 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC13.44□□□□□ -0.26
VBP1P61758 ATP5G2P1-201ENST00000433580 426 ntBASIC13.44□□□□□ -0.26
VBP1P61758 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
VBP1P61758 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.44□□□□□ -0.26
VBP1P61758 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
VBP1P61758 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VBP1P61758 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.44□□□□□ -0.26
VBP1P61758 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC13.44□□□□□ -0.26
VBP1P61758 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
VBP1P61758 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.44□□□□□ -0.26
VBP1P61758 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VBP1P61758 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.44□□□□□ -0.26
VBP1P61758 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
VBP1P61758 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VBP1P61758 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VBP1P61758 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VBP1P61758 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VBP1P61758 CES1P1-201ENST00000421606 1704 ntBASIC13.44□□□□□ -0.26
VBP1P61758 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
VBP1P61758 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC13.44□□□□□ -0.26
VBP1P61758 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
VBP1P61758 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.44□□□□□ -0.26
VBP1P61758 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VBP1P61758 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
VBP1P61758 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
VBP1P61758 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VBP1P61758 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VBP1P61758 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
VBP1P61758 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
VBP1P61758 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
VBP1P61758 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VBP1P61758 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VBP1P61758 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
VBP1P61758 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.43□□□□□ -0.26
VBP1P61758 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.43□□□□□ -0.26
VBP1P61758 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.43□□□□□ -0.26
VBP1P61758 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
VBP1P61758 RN7SL832P-201ENST00000607781 1756 ntBASIC13.43□□□□□ -0.26
VBP1P61758 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
VBP1P61758 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
VBP1P61758 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
VBP1P61758 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
VBP1P61758 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
VBP1P61758 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VBP1P61758 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VBP1P61758 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
VBP1P61758 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
VBP1P61758 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VBP1P61758 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
VBP1P61758 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VBP1P61758 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VBP1P61758 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VBP1P61758 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
VBP1P61758 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VBP1P61758 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VBP1P61758 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
VBP1P61758 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.43□□□□□ -0.26
VBP1P61758 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.43□□□□□ -0.26
VBP1P61758 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
VBP1P61758 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.43□□□□□ -0.26
VBP1P61758 TPM1-218ENST00000559281 851 ntTSL 5 BASIC13.43□□□□□ -0.26
VBP1P61758 AC012640.2-201ENST00000561606 901 ntBASIC13.43□□□□□ -0.26
VBP1P61758 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.43□□□□□ -0.26
VBP1P61758 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.43□□□□□ -0.26
VBP1P61758 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VBP1P61758 AC015910.1-201ENST00000579400 975 ntBASIC13.43□□□□□ -0.26
VBP1P61758 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC13.43□□□□□ -0.26
VBP1P61758 DBP-204ENST00000599385 709 ntTSL 3 BASIC13.43□□□□□ -0.26
VBP1P61758 AC090643.2-201ENST00000623442 2029 ntBASIC13.43□□□□□ -0.26
VBP1P61758 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VBP1P61758 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VBP1P61758 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
VBP1P61758 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.43□□□□□ -0.26
VBP1P61758 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
VBP1P61758 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
VBP1P61758 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
VBP1P61758 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.43□□□□□ -0.26
VBP1P61758 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VBP1P61758 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
VBP1P61758 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
VBP1P61758 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
VBP1P61758 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
VBP1P61758 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
VBP1P61758 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
VBP1P61758 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC13.42□□□□□ -0.26
VBP1P61758 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC13.42□□□□□ -0.26
VBP1P61758 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
VBP1P61758 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
VBP1P61758 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
VBP1P61758 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.42□□□□□ -0.26
VBP1P61758 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC13.42□□□□□ -0.26
VBP1P61758 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VBP1P61758 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.42□□□□□ -0.26
VBP1P61758 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
VBP1P61758 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VBP1P61758 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VBP1P61758 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VBP1P61758 DFFB-203ENST00000341385 572 ntTSL 5 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms