Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 MIR6080-201ENST00000617359 66 ntBASIC13.43□□□□□ -0.26
CAV3P56539 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.43□□□□□ -0.26
CAV3P56539 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CAV3P56539 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CAV3P56539 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
CAV3P56539 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CAV3P56539 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CAV3P56539 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.43□□□□□ -0.26
CAV3P56539 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CAV3P56539 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
CAV3P56539 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CAV3P56539 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CAV3P56539 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.43□□□□□ -0.26
CAV3P56539 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CAV3P56539 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CAV3P56539 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.43□□□□□ -0.26
CAV3P56539 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CAV3P56539 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.43□□□□□ -0.26
CAV3P56539 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CAV3P56539 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CAV3P56539 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CAV3P56539 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.43□□□□□ -0.26
CAV3P56539 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CAV3P56539 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CAV3P56539 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CAV3P56539 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
CAV3P56539 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
CAV3P56539 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CAV3P56539 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.42□□□□□ -0.26
CAV3P56539 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CAV3P56539 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CAV3P56539 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.42□□□□□ -0.26
CAV3P56539 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CAV3P56539 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.42□□□□□ -0.26
CAV3P56539 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CAV3P56539 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CAV3P56539 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CAV3P56539 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CAV3P56539 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CAV3P56539 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.42□□□□□ -0.26
CAV3P56539 METTL21AP1-201ENST00000438852 635 ntBASIC13.42□□□□□ -0.26
CAV3P56539 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.42□□□□□ -0.26
CAV3P56539 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.42□□□□□ -0.26
CAV3P56539 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CAV3P56539 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.42□□□□□ -0.26
CAV3P56539 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CAV3P56539 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CAV3P56539 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
CAV3P56539 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.42□□□□□ -0.26
CAV3P56539 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.42□□□□□ -0.26
CAV3P56539 AC003101.2-201ENST00000612557 442 ntBASIC13.42□□□□□ -0.26
CAV3P56539 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.42□□□□□ -0.26
CAV3P56539 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.42□□□□□ -0.26
CAV3P56539 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.42□□□□□ -0.26
CAV3P56539 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CAV3P56539 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CAV3P56539 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CAV3P56539 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CAV3P56539 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CAV3P56539 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
CAV3P56539 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CAV3P56539 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.42□□□□□ -0.26
CAV3P56539 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.42□□□□□ -0.26
CAV3P56539 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CAV3P56539 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CAV3P56539 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CAV3P56539 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CAV3P56539 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.42□□□□□ -0.26
CAV3P56539 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CAV3P56539 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CAV3P56539 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CAV3P56539 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CAV3P56539 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CAV3P56539 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.41□□□□□ -0.26
CAV3P56539 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CAV3P56539 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CAV3P56539 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CAV3P56539 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CAV3P56539 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CAV3P56539 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CAV3P56539 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.41□□□□□ -0.26
CAV3P56539 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.41□□□□□ -0.26
CAV3P56539 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.41□□□□□ -0.26
CAV3P56539 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CAV3P56539 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CAV3P56539 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CAV3P56539 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CAV3P56539 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CAV3P56539 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CAV3P56539 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CAV3P56539 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CAV3P56539 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.41□□□□□ -0.26
CAV3P56539 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.41□□□□□ -0.26
CAV3P56539 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.41□□□□□ -0.26
CAV3P56539 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.41□□□□□ -0.26
CAV3P56539 TPT1P11-201ENST00000458482 498 ntBASIC13.41□□□□□ -0.26
CAV3P56539 AC092183.1-201ENST00000469884 875 ntBASIC13.41□□□□□ -0.26
CAV3P56539 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CAV3P56539 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.41□□□□□ -0.26
CAV3P56539 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms