Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FOXG1P55316 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FOXG1P55316 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.07□□□□□ -0.32
FOXG1P55316 BRWD1P1-201ENST00000401091 371 ntBASIC13.07□□□□□ -0.32
FOXG1P55316 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
FOXG1P55316 MTX1P1-201ENST00000440904 838 ntBASIC13.07□□□□□ -0.32
FOXG1P55316 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.07□□□□□ -0.32
FOXG1P55316 Z93015.1-201ENST00000451718 390 ntBASIC13.07□□□□□ -0.32
FOXG1P55316 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.07□□□□□ -0.32
FOXG1P55316 GCOM2-201ENST00000509133 1104 ntBASIC13.07□□□□□ -0.32
FOXG1P55316 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
FOXG1P55316 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
FOXG1P55316 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.07□□□□□ -0.32
FOXG1P55316 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
FOXG1P55316 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.07□□□□□ -0.32
FOXG1P55316 AL136301.1-201ENST00000615830 422 ntBASIC13.07□□□□□ -0.32
FOXG1P55316 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.07□□□□□ -0.32
FOXG1P55316 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.07□□□□□ -0.32
FOXG1P55316 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FOXG1P55316 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
FOXG1P55316 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.07□□□□□ -0.32
FOXG1P55316 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
FOXG1P55316 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
FOXG1P55316 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FOXG1P55316 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FOXG1P55316 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
FOXG1P55316 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
FOXG1P55316 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
FOXG1P55316 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
FOXG1P55316 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.07□□□□□ -0.32
FOXG1P55316 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
FOXG1P55316 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FOXG1P55316 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.06□□□□□ -0.32
FOXG1P55316 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FOXG1P55316 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
FOXG1P55316 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FOXG1P55316 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
FOXG1P55316 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FOXG1P55316 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FOXG1P55316 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
FOXG1P55316 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
FOXG1P55316 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FOXG1P55316 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FOXG1P55316 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
FOXG1P55316 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FOXG1P55316 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.06□□□□□ -0.32
FOXG1P55316 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.06□□□□□ -0.32
FOXG1P55316 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
FOXG1P55316 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.06□□□□□ -0.32
FOXG1P55316 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.06□□□□□ -0.32
FOXG1P55316 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.06□□□□□ -0.32
FOXG1P55316 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.06□□□□□ -0.32
FOXG1P55316 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.06□□□□□ -0.32
FOXG1P55316 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.06□□□□□ -0.32
FOXG1P55316 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.06□□□□□ -0.32
FOXG1P55316 RN7SL219P-201ENST00000582872 296 ntBASIC13.06□□□□□ -0.32
FOXG1P55316 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.06□□□□□ -0.32
FOXG1P55316 AC091271.1-201ENST00000611877 1162 ntBASIC13.06□□□□□ -0.32
FOXG1P55316 AC005695.3-201ENST00000614522 232 ntBASIC13.06□□□□□ -0.32
FOXG1P55316 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.06□□□□□ -0.32
FOXG1P55316 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
FOXG1P55316 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.06□□□□□ -0.32
FOXG1P55316 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
FOXG1P55316 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FOXG1P55316 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FOXG1P55316 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
FOXG1P55316 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
FOXG1P55316 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FOXG1P55316 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
FOXG1P55316 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.06□□□□□ -0.32
FOXG1P55316 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
FOXG1P55316 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FOXG1P55316 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
FOXG1P55316 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FOXG1P55316 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FOXG1P55316 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.06□□□□□ -0.32
FOXG1P55316 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
FOXG1P55316 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
FOXG1P55316 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.06□□□□□ -0.32
FOXG1P55316 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FOXG1P55316 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
FOXG1P55316 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
FOXG1P55316 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
FOXG1P55316 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
FOXG1P55316 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
FOXG1P55316 E2F3P2-201ENST00000447755 1422 ntBASIC13.05□□□□□ -0.32
FOXG1P55316 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
FOXG1P55316 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
FOXG1P55316 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
FOXG1P55316 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
FOXG1P55316 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.05□□□□□ -0.32
FOXG1P55316 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
FOXG1P55316 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.05□□□□□ -0.32
FOXG1P55316 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
FOXG1P55316 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
FOXG1P55316 AC018735.1-201ENST00000437208 1502 ntBASIC13.05□□□□□ -0.32
FOXG1P55316 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.05□□□□□ -0.32
FOXG1P55316 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
FOXG1P55316 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.05□□□□□ -0.32
FOXG1P55316 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms