Protein–RNA interactions for Protein: P55211

CASP9, Caspase-9, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9P55211 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.21□□□□□ -0.13
CASP9P55211 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.21□□□□□ -0.13
CASP9P55211 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CASP9P55211 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
CASP9P55211 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.21□□□□□ -0.13
CASP9P55211 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CASP9P55211 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CASP9P55211 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CASP9P55211 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CASP9P55211 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CASP9P55211 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CASP9P55211 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CASP9P55211 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.14
CASP9P55211 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.21□□□□□ -0.14
CASP9P55211 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.21□□□□□ -0.14
CASP9P55211 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CASP9P55211 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CASP9P55211 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.21□□□□□ -0.14
CASP9P55211 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.21□□□□□ -0.14
CASP9P55211 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.21□□□□□ -0.14
CASP9P55211 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
CASP9P55211 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CASP9P55211 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CASP9P55211 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.2□□□□□ -0.14
CASP9P55211 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CASP9P55211 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CASP9P55211 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
CASP9P55211 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CASP9P55211 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.2□□□□□ -0.14
CASP9P55211 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CASP9P55211 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.2□□□□□ -0.14
CASP9P55211 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CASP9P55211 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CASP9P55211 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
CASP9P55211 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CASP9P55211 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CASP9P55211 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.2□□□□□ -0.14
CASP9P55211 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CASP9P55211 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.2□□□□□ -0.14
CASP9P55211 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.2□□□□□ -0.14
CASP9P55211 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.2□□□□□ -0.14
CASP9P55211 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CASP9P55211 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CASP9P55211 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.2□□□□□ -0.14
CASP9P55211 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CASP9P55211 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.2□□□□□ -0.14
CASP9P55211 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CASP9P55211 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.2□□□□□ -0.14
CASP9P55211 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.2□□□□□ -0.14
CASP9P55211 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.2□□□□□ -0.14
CASP9P55211 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.2□□□□□ -0.14
CASP9P55211 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.2□□□□□ -0.14
CASP9P55211 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CASP9P55211 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.2□□□□□ -0.14
CASP9P55211 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.2□□□□□ -0.14
CASP9P55211 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CASP9P55211 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CASP9P55211 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.2□□□□□ -0.14
CASP9P55211 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CASP9P55211 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CASP9P55211 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CASP9P55211 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CASP9P55211 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.2□□□□□ -0.14
CASP9P55211 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CASP9P55211 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.2□□□□□ -0.14
CASP9P55211 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CASP9P55211 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CASP9P55211 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CASP9P55211 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CASP9P55211 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CASP9P55211 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CASP9P55211 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CASP9P55211 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.2□□□□□ -0.14
CASP9P55211 AL928921.2-201ENST00000641325 2442 ntBASIC14.2□□□□□ -0.14
CASP9P55211 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CASP9P55211 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CASP9P55211 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.19□□□□□ -0.14
CASP9P55211 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CASP9P55211 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CASP9P55211 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CASP9P55211 AC104581.4-201ENST00000623126 3052 ntBASIC14.19□□□□□ -0.14
CASP9P55211 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CASP9P55211 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.19□□□□□ -0.14
CASP9P55211 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CASP9P55211 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CASP9P55211 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CASP9P55211 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.19□□□□□ -0.14
CASP9P55211 AC041040.2-201ENST00000622926 2899 ntBASIC14.19□□□□□ -0.14
CASP9P55211 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CASP9P55211 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CASP9P55211 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CASP9P55211 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.19□□□□□ -0.14
CASP9P55211 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.19□□□□□ -0.14
CASP9P55211 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.19□□□□□ -0.14
CASP9P55211 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.19□□□□□ -0.14
CASP9P55211 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CASP9P55211 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.19□□□□□ -0.14
CASP9P55211 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.19□□□□□ -0.14
CASP9P55211 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.19□□□□□ -0.14
CASP9P55211 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms