Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
NCKAP1LP55160 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCKAP1LP55160 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCKAP1LP55160 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCKAP1LP55160 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NCKAP1LP55160 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NCKAP1LP55160 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NCKAP1LP55160 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCKAP1LP55160 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCKAP1LP55160 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.29■□□□□ 0.2
NCKAP1LP55160 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NCKAP1LP55160 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NCKAP1LP55160 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCKAP1LP55160 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCKAP1LP55160 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCKAP1LP55160 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCKAP1LP55160 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.28■□□□□ 0.2
NCKAP1LP55160 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NCKAP1LP55160 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.28■□□□□ 0.2
NCKAP1LP55160 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NCKAP1LP55160 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCKAP1LP55160 LINC00552-201ENST00000625151 2579 ntBASIC16.28■□□□□ 0.2
NCKAP1LP55160 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NCKAP1LP55160 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCKAP1LP55160 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCKAP1LP55160 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCKAP1LP55160 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
NCKAP1LP55160 Z93015.1-201ENST00000451718 390 ntBASIC16.28■□□□□ 0.2
NCKAP1LP55160 CICP12-201ENST00000455801 843 ntBASIC16.28■□□□□ 0.2
NCKAP1LP55160 TPT1P11-201ENST00000458482 498 ntBASIC16.28■□□□□ 0.2
NCKAP1LP55160 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.28■□□□□ 0.2
NCKAP1LP55160 RPSAP36-202ENST00000494591 1261 ntBASIC16.28■□□□□ 0.2
NCKAP1LP55160 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.28■□□□□ 0.2
NCKAP1LP55160 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NCKAP1LP55160 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NCKAP1LP55160 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NCKAP1LP55160 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCKAP1LP55160 AC139712.1-201ENST00000378256 1875 ntBASIC16.28■□□□□ 0.2
NCKAP1LP55160 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NCKAP1LP55160 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCKAP1LP55160 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
NCKAP1LP55160 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.28■□□□□ 0.2
NCKAP1LP55160 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.28■□□□□ 0.2
NCKAP1LP55160 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
NCKAP1LP55160 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCKAP1LP55160 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCKAP1LP55160 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.28■□□□□ 0.2
NCKAP1LP55160 AGGF1P1-201ENST00000509500 2073 ntBASIC16.28■□□□□ 0.2
NCKAP1LP55160 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCKAP1LP55160 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
NCKAP1LP55160 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NCKAP1LP55160 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NCKAP1LP55160 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.27■□□□□ 0.2
NCKAP1LP55160 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
NCKAP1LP55160 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NCKAP1LP55160 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NCKAP1LP55160 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
NCKAP1LP55160 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.27■□□□□ 0.2
NCKAP1LP55160 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.27■□□□□ 0.2
NCKAP1LP55160 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NCKAP1LP55160 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NCKAP1LP55160 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.27■□□□□ 0.2
NCKAP1LP55160 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NCKAP1LP55160 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NCKAP1LP55160 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.27■□□□□ 0.2
NCKAP1LP55160 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
NCKAP1LP55160 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NCKAP1LP55160 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
NCKAP1LP55160 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.27■□□□□ 0.2
NCKAP1LP55160 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
NCKAP1LP55160 MTX1P1-201ENST00000440904 838 ntBASIC16.27■□□□□ 0.2
NCKAP1LP55160 GOLGA2P4-201ENST00000441462 777 ntBASIC16.27■□□□□ 0.2
NCKAP1LP55160 HSPB1P2-201ENST00000448722 546 ntBASIC16.27■□□□□ 0.2
NCKAP1LP55160 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.27■□□□□ 0.2
NCKAP1LP55160 AC022447.6-201ENST00000515522 438 ntBASIC16.27■□□□□ 0.2
NCKAP1LP55160 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.27■□□□□ 0.2
NCKAP1LP55160 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.27■□□□□ 0.2
NCKAP1LP55160 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.27■□□□□ 0.2
NCKAP1LP55160 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.27■□□□□ 0.2
NCKAP1LP55160 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
NCKAP1LP55160 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NCKAP1LP55160 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.27■□□□□ 0.2
NCKAP1LP55160 AC009955.4-201ENST00000597192 544 ntBASIC16.27■□□□□ 0.2
NCKAP1LP55160 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NCKAP1LP55160 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.27■□□□□ 0.2
NCKAP1LP55160 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.27■□□□□ 0.2
NCKAP1LP55160 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
NCKAP1LP55160 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NCKAP1LP55160 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
NCKAP1LP55160 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
NCKAP1LP55160 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NCKAP1LP55160 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
NCKAP1LP55160 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NCKAP1LP55160 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NCKAP1LP55160 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NCKAP1LP55160 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
NCKAP1LP55160 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
NCKAP1LP55160 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NCKAP1LP55160 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
NCKAP1LP55160 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms