Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN5P54829 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN5P54829 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN5P54829 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN5P54829 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.46■□□□□ 0.07
PTPN5P54829 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN5P54829 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN5P54829 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN5P54829 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
PTPN5P54829 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN5P54829 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN5P54829 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN5P54829 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN5P54829 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN5P54829 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
PTPN5P54829 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN5P54829 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN5P54829 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
PTPN5P54829 AL512430.1-201ENST00000392575 860 ntBASIC15.46■□□□□ 0.07
PTPN5P54829 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN5P54829 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC15.46■□□□□ 0.07
PTPN5P54829 AC012362.1-201ENST00000434906 739 ntBASIC15.46■□□□□ 0.07
PTPN5P54829 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.46■□□□□ 0.07
PTPN5P54829 GAPDHP40-201ENST00000505218 1006 ntBASIC15.46■□□□□ 0.07
PTPN5P54829 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.46■□□□□ 0.07
PTPN5P54829 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN5P54829 AC012158.2-201ENST00000536546 354 ntBASIC15.46■□□□□ 0.07
PTPN5P54829 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC15.46■□□□□ 0.07
PTPN5P54829 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.46■□□□□ 0.07
PTPN5P54829 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC15.46■□□□□ 0.07
PTPN5P54829 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.46■□□□□ 0.07
PTPN5P54829 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN5P54829 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC15.46■□□□□ 0.07
PTPN5P54829 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.46■□□□□ 0.07
PTPN5P54829 BNIP3P13-201ENST00000599968 566 ntBASIC15.46■□□□□ 0.07
PTPN5P54829 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
PTPN5P54829 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.46■□□□□ 0.07
PTPN5P54829 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC15.46■□□□□ 0.07
PTPN5P54829 AC022960.2-201ENST00000616300 666 ntBASIC15.46■□□□□ 0.07
PTPN5P54829 AL136295.7-201ENST00000619226 1200 ntBASIC15.46■□□□□ 0.07
PTPN5P54829 AP001002.3-201ENST00000623482 206 ntBASIC15.46■□□□□ 0.07
PTPN5P54829 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN5P54829 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
PTPN5P54829 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN5P54829 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN5P54829 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.46■□□□□ 0.07
PTPN5P54829 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.46■□□□□ 0.07
PTPN5P54829 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN5P54829 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN5P54829 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.46■□□□□ 0.07
PTPN5P54829 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.46■□□□□ 0.06
PTPN5P54829 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.46■□□□□ 0.06
PTPN5P54829 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PTPN5P54829 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PTPN5P54829 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
PTPN5P54829 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PTPN5P54829 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.06
PTPN5P54829 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PTPN5P54829 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PTPN5P54829 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.45■□□□□ 0.06
PTPN5P54829 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
PTPN5P54829 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN5P54829 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN5P54829 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN5P54829 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN5P54829 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PTPN5P54829 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN5P54829 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN5P54829 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PTPN5P54829 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN5P54829 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN5P54829 TBC1D3J-201ENST00000620719 1426 ntBASIC15.45■□□□□ 0.06
PTPN5P54829 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN5P54829 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN5P54829 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN5P54829 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PTPN5P54829 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.45■□□□□ 0.06
PTPN5P54829 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
PTPN5P54829 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN5P54829 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.45■□□□□ 0.06
PTPN5P54829 AL627231.1-201ENST00000394467 1125 ntBASIC15.45■□□□□ 0.06
PTPN5P54829 GHSR-202ENST00000427970 912 ntBASIC15.45■□□□□ 0.06
PTPN5P54829 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC15.45■□□□□ 0.06
PTPN5P54829 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC15.45■□□□□ 0.06
PTPN5P54829 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC15.45■□□□□ 0.06
PTPN5P54829 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.45■□□□□ 0.06
PTPN5P54829 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
PTPN5P54829 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN5P54829 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN5P54829 IRF3-215ENST00000596822 823 ntTSL 3 BASIC15.45■□□□□ 0.06
PTPN5P54829 YRDCP1-201ENST00000621419 643 ntBASIC15.45■□□□□ 0.06
PTPN5P54829 PLS3-210ENST00000626746 216 ntTSL 4 BASIC15.45■□□□□ 0.06
PTPN5P54829 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.45■□□□□ 0.06
PTPN5P54829 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC15.45■□□□□ 0.06
PTPN5P54829 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN5P54829 AC126177.1-201ENST00000547829 2218 ntBASIC15.45■□□□□ 0.06
PTPN5P54829 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
PTPN5P54829 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.45■□□□□ 0.06
PTPN5P54829 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN5P54829 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms