Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PMS1P54277 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PMS1P54277 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PMS1P54277 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PMS1P54277 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.42■□□□□ 0.22
PMS1P54277 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
PMS1P54277 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PMS1P54277 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PMS1P54277 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PMS1P54277 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PMS1P54277 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PMS1P54277 TLE1P1-201ENST00000422965 589 ntBASIC16.42■□□□□ 0.22
PMS1P54277 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PMS1P54277 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.42■□□□□ 0.22
PMS1P54277 KRT18P25-201ENST00000508931 1278 ntBASIC16.42■□□□□ 0.22
PMS1P54277 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.42■□□□□ 0.22
PMS1P54277 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PMS1P54277 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.42■□□□□ 0.22
PMS1P54277 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.42■□□□□ 0.22
PMS1P54277 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PMS1P54277 AL138709.1-201ENST00000614840 1693 ntBASIC16.42■□□□□ 0.22
PMS1P54277 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PMS1P54277 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PMS1P54277 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PMS1P54277 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PMS1P54277 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PMS1P54277 MYADML-201ENST00000474610 2147 ntBASIC16.42■□□□□ 0.22
PMS1P54277 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PMS1P54277 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC16.41■□□□□ 0.22
PMS1P54277 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PMS1P54277 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PMS1P54277 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PMS1P54277 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.41■□□□□ 0.22
PMS1P54277 AL136172.1-201ENST00000598590 1394 ntBASIC16.41■□□□□ 0.22
PMS1P54277 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PMS1P54277 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PMS1P54277 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PMS1P54277 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PMS1P54277 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PMS1P54277 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PMS1P54277 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PMS1P54277 AC090505.1-201ENST00000430515 1834 ntBASIC16.41■□□□□ 0.22
PMS1P54277 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PMS1P54277 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PMS1P54277 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PMS1P54277 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PMS1P54277 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PMS1P54277 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.41■□□□□ 0.22
PMS1P54277 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.41■□□□□ 0.22
PMS1P54277 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.41■□□□□ 0.22
PMS1P54277 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.41■□□□□ 0.22
PMS1P54277 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.41■□□□□ 0.22
PMS1P54277 AC012441.1-201ENST00000446669 685 ntBASIC16.41■□□□□ 0.22
PMS1P54277 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.41■□□□□ 0.22
PMS1P54277 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.41■□□□□ 0.22
PMS1P54277 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PMS1P54277 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.41■□□□□ 0.22
PMS1P54277 MIR5189-201ENST00000577370 114 ntBASIC16.41■□□□□ 0.22
PMS1P54277 AC138696.2-201ENST00000607376 223 ntBASIC16.41■□□□□ 0.22
PMS1P54277 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PMS1P54277 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PMS1P54277 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC16.41■□□□□ 0.22
PMS1P54277 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PMS1P54277 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
PMS1P54277 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PMS1P54277 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
PMS1P54277 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PMS1P54277 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
PMS1P54277 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PMS1P54277 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PMS1P54277 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC16.4■□□□□ 0.22
PMS1P54277 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PMS1P54277 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PMS1P54277 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PMS1P54277 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PMS1P54277 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PMS1P54277 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PMS1P54277 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PMS1P54277 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PMS1P54277 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PMS1P54277 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PMS1P54277 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC16.4■□□□□ 0.22
PMS1P54277 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PMS1P54277 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.4■□□□□ 0.22
PMS1P54277 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC16.4■□□□□ 0.22
PMS1P54277 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PMS1P54277 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
PMS1P54277 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PMS1P54277 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PMS1P54277 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.4■□□□□ 0.22
PMS1P54277 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC16.4■□□□□ 0.22
PMS1P54277 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PMS1P54277 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PMS1P54277 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PMS1P54277 TERF1P3-201ENST00000505638 1227 ntBASIC16.4■□□□□ 0.22
PMS1P54277 AC106760.1-201ENST00000508690 800 ntBASIC16.4■□□□□ 0.22
PMS1P54277 GCOM2-201ENST00000509133 1104 ntBASIC16.4■□□□□ 0.22
PMS1P54277 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.4■□□□□ 0.22
PMS1P54277 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.4■□□□□ 0.22
PMS1P54277 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms