Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
HMGA2P52926 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.62□□□□□ -0.23
HMGA2P52926 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.62□□□□□ -0.23
HMGA2P52926 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMGA2P52926 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HMGA2P52926 AC015688.4-201ENST00000580780 1647 ntBASIC13.62□□□□□ -0.23
HMGA2P52926 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMGA2P52926 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.62□□□□□ -0.23
HMGA2P52926 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
HMGA2P52926 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMGA2P52926 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMGA2P52926 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HMGA2P52926 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
HMGA2P52926 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMGA2P52926 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMGA2P52926 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.62□□□□□ -0.23
HMGA2P52926 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HMGA2P52926 EIF3FP3-201ENST00000434851 1086 ntBASIC13.62□□□□□ -0.23
HMGA2P52926 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.62□□□□□ -0.23
HMGA2P52926 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMGA2P52926 AC135586.1-201ENST00000539323 574 ntBASIC13.62□□□□□ -0.23
HMGA2P52926 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.62□□□□□ -0.23
HMGA2P52926 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.62□□□□□ -0.23
HMGA2P52926 RRP7BP-205ENST00000566851 833 ntBASIC13.62□□□□□ -0.23
HMGA2P52926 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.62□□□□□ -0.23
HMGA2P52926 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.62□□□□□ -0.23
HMGA2P52926 AC007431.3-201ENST00000623221 587 ntBASIC13.62□□□□□ -0.23
HMGA2P52926 AC004840.1-201ENST00000636359 365 ntBASIC13.62□□□□□ -0.23
HMGA2P52926 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMGA2P52926 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
HMGA2P52926 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
HMGA2P52926 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMGA2P52926 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
HMGA2P52926 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
HMGA2P52926 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HMGA2P52926 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMGA2P52926 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.62□□□□□ -0.23
HMGA2P52926 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
HMGA2P52926 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HMGA2P52926 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMGA2P52926 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
HMGA2P52926 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
HMGA2P52926 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
HMGA2P52926 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.62□□□□□ -0.23
HMGA2P52926 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMGA2P52926 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMGA2P52926 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMGA2P52926 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMGA2P52926 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGA2P52926 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGA2P52926 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
HMGA2P52926 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.61□□□□□ -0.23
HMGA2P52926 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGA2P52926 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGA2P52926 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.61□□□□□ -0.23
HMGA2P52926 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGA2P52926 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGA2P52926 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGA2P52926 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.61□□□□□ -0.23
HMGA2P52926 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGA2P52926 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGA2P52926 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
HMGA2P52926 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.61□□□□□ -0.23
HMGA2P52926 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGA2P52926 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.61□□□□□ -0.23
HMGA2P52926 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.61□□□□□ -0.23
HMGA2P52926 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.61□□□□□ -0.23
HMGA2P52926 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGA2P52926 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGA2P52926 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.61□□□□□ -0.23
HMGA2P52926 TREML5P-201ENST00000421694 576 ntBASIC13.61□□□□□ -0.23
HMGA2P52926 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.61□□□□□ -0.23
HMGA2P52926 AP000347.1-202ENST00000435868 847 ntBASIC13.61□□□□□ -0.23
HMGA2P52926 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.61□□□□□ -0.23
HMGA2P52926 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HMGA2P52926 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.61□□□□□ -0.23
HMGA2P52926 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.61□□□□□ -0.23
HMGA2P52926 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.61□□□□□ -0.23
HMGA2P52926 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.61□□□□□ -0.23
HMGA2P52926 SPDYE22P-201ENST00000582158 798 ntBASIC13.61□□□□□ -0.23
HMGA2P52926 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.61□□□□□ -0.23
HMGA2P52926 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HMGA2P52926 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGA2P52926 AC079781.5-202ENST00000641784 3743 ntBASIC13.61□□□□□ -0.23
HMGA2P52926 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGA2P52926 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HMGA2P52926 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HMGA2P52926 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.61□□□□□ -0.23
HMGA2P52926 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.61□□□□□ -0.23
HMGA2P52926 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGA2P52926 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
HMGA2P52926 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
HMGA2P52926 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HMGA2P52926 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
HMGA2P52926 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
HMGA2P52926 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGA2P52926 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGA2P52926 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HMGA2P52926 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.61□□□□□ -0.23
HMGA2P52926 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms