Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLCSP50747 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
HLCSP50747 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLCSP50747 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLCSP50747 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLCSP50747 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLCSP50747 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HLCSP50747 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLCSP50747 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLCSP50747 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HLCSP50747 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.37□□□□□ -0.11
HLCSP50747 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLCSP50747 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLCSP50747 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HLCSP50747 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLCSP50747 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLCSP50747 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLCSP50747 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLCSP50747 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.36□□□□□ -0.11
HLCSP50747 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.36□□□□□ -0.11
HLCSP50747 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.36□□□□□ -0.11
HLCSP50747 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLCSP50747 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLCSP50747 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.36□□□□□ -0.11
HLCSP50747 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
HLCSP50747 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
HLCSP50747 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLCSP50747 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.36□□□□□ -0.11
HLCSP50747 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.36□□□□□ -0.11
HLCSP50747 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLCSP50747 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLCSP50747 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.36□□□□□ -0.11
HLCSP50747 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLCSP50747 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLCSP50747 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLCSP50747 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
HLCSP50747 ARSEP1-201ENST00000420443 635 ntBASIC14.36□□□□□ -0.11
HLCSP50747 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLCSP50747 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.36□□□□□ -0.11
HLCSP50747 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.36□□□□□ -0.11
HLCSP50747 VDAC1P7-201ENST00000462417 847 ntBASIC14.36□□□□□ -0.11
HLCSP50747 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.36□□□□□ -0.11
HLCSP50747 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.36□□□□□ -0.11
HLCSP50747 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.36□□□□□ -0.11
HLCSP50747 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.36□□□□□ -0.11
HLCSP50747 KRT17P8-201ENST00000540749 863 ntBASIC14.36□□□□□ -0.11
HLCSP50747 AC124283.3-201ENST00000570869 594 ntBASIC14.36□□□□□ -0.11
HLCSP50747 AC015910.1-201ENST00000579400 975 ntBASIC14.36□□□□□ -0.11
HLCSP50747 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.36□□□□□ -0.11
HLCSP50747 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLCSP50747 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLCSP50747 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.36□□□□□ -0.11
HLCSP50747 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.36□□□□□ -0.11
HLCSP50747 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.36□□□□□ -0.11
HLCSP50747 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.36□□□□□ -0.11
HLCSP50747 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLCSP50747 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLCSP50747 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLCSP50747 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLCSP50747 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLCSP50747 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLCSP50747 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLCSP50747 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLCSP50747 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLCSP50747 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLCSP50747 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLCSP50747 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HLCSP50747 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLCSP50747 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.36□□□□□ -0.11
HLCSP50747 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.36□□□□□ -0.11
HLCSP50747 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.36□□□□□ -0.11
HLCSP50747 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
HLCSP50747 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLCSP50747 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.35□□□□□ -0.11
HLCSP50747 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.35□□□□□ -0.11
HLCSP50747 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.35□□□□□ -0.11
HLCSP50747 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLCSP50747 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.35□□□□□ -0.11
HLCSP50747 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
HLCSP50747 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.35□□□□□ -0.11
HLCSP50747 PTENP1-202ENST00000532280 3996 ntBASIC14.35□□□□□ -0.11
HLCSP50747 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLCSP50747 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
HLCSP50747 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
HLCSP50747 C1QBPP1-201ENST00000400117 770 ntBASIC14.35□□□□□ -0.11
HLCSP50747 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.35□□□□□ -0.11
HLCSP50747 ATP5G2P4-201ENST00000442175 420 ntBASIC14.35□□□□□ -0.11
HLCSP50747 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLCSP50747 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HLCSP50747 IGHV3-71-201ENST00000523324 359 ntBASIC14.35□□□□□ -0.11
HLCSP50747 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.35□□□□□ -0.11
HLCSP50747 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.35□□□□□ -0.11
HLCSP50747 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.35□□□□□ -0.11
HLCSP50747 RAB43P1-201ENST00000561790 589 ntBASIC14.35□□□□□ -0.11
HLCSP50747 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.35□□□□□ -0.11
HLCSP50747 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.35□□□□□ -0.11
HLCSP50747 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HLCSP50747 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLCSP50747 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLCSP50747 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms