Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
KCNA3P22001 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KCNA3P22001 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.93■□□□□ 0.46
KCNA3P22001 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.93■□□□□ 0.46
KCNA3P22001 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KCNA3P22001 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KCNA3P22001 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
KCNA3P22001 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
KCNA3P22001 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KCNA3P22001 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.93■□□□□ 0.46
KCNA3P22001 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KCNA3P22001 PYY2-201ENST00000315776 282 ntBASIC17.93■□□□□ 0.46
KCNA3P22001 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC17.93■□□□□ 0.46
KCNA3P22001 HLA-DPA2-205ENST00000433582 733 ntBASIC17.93■□□□□ 0.46
KCNA3P22001 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC17.93■□□□□ 0.46
KCNA3P22001 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC17.93■□□□□ 0.46
KCNA3P22001 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC17.93■□□□□ 0.46
KCNA3P22001 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KCNA3P22001 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KCNA3P22001 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC17.93■□□□□ 0.46
KCNA3P22001 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.93■□□□□ 0.46
KCNA3P22001 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KCNA3P22001 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KCNA3P22001 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KCNA3P22001 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KCNA3P22001 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KCNA3P22001 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KCNA3P22001 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC17.93■□□□□ 0.46
KCNA3P22001 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KCNA3P22001 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KCNA3P22001 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
KCNA3P22001 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
KCNA3P22001 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
KCNA3P22001 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
KCNA3P22001 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KCNA3P22001 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
KCNA3P22001 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KCNA3P22001 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.92■□□□□ 0.46
KCNA3P22001 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KCNA3P22001 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KCNA3P22001 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KCNA3P22001 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KCNA3P22001 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KCNA3P22001 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
KCNA3P22001 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KCNA3P22001 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC17.92■□□□□ 0.46
KCNA3P22001 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
KCNA3P22001 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
KCNA3P22001 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC17.92■□□□□ 0.46
KCNA3P22001 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC17.92■□□□□ 0.46
KCNA3P22001 MIR6816-201ENST00000620368 66 ntBASIC17.92■□□□□ 0.46
KCNA3P22001 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KCNA3P22001 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KCNA3P22001 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC17.92■□□□□ 0.46
KCNA3P22001 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KCNA3P22001 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.92■□□□□ 0.46
KCNA3P22001 AL391005.1-201ENST00000623953 2435 ntBASIC17.92■□□□□ 0.46
KCNA3P22001 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
KCNA3P22001 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KCNA3P22001 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KCNA3P22001 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KCNA3P22001 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KCNA3P22001 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC17.92■□□□□ 0.46
KCNA3P22001 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KCNA3P22001 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KCNA3P22001 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
KCNA3P22001 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KCNA3P22001 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
KCNA3P22001 AL136172.1-201ENST00000598590 1394 ntBASIC17.91■□□□□ 0.46
KCNA3P22001 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC17.91■□□□□ 0.46
KCNA3P22001 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KCNA3P22001 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KCNA3P22001 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
KCNA3P22001 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KCNA3P22001 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.91■□□□□ 0.46
KCNA3P22001 AC009093.10-201ENST00000641956 1442 ntBASIC17.91■□□□□ 0.46
KCNA3P22001 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
KCNA3P22001 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
KCNA3P22001 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KCNA3P22001 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC17.91■□□□□ 0.46
KCNA3P22001 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC17.91■□□□□ 0.46
KCNA3P22001 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KCNA3P22001 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC17.91■□□□□ 0.46
KCNA3P22001 AC092580.1-201ENST00000433998 658 ntBASIC17.91■□□□□ 0.46
KCNA3P22001 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC17.91■□□□□ 0.46
KCNA3P22001 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC17.91■□□□□ 0.46
KCNA3P22001 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC17.91■□□□□ 0.46
KCNA3P22001 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC17.91■□□□□ 0.46
KCNA3P22001 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KCNA3P22001 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC17.91■□□□□ 0.46
KCNA3P22001 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
KCNA3P22001 SIGLEC22P-201ENST00000599104 714 ntBASIC17.91■□□□□ 0.46
KCNA3P22001 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC17.91■□□□□ 0.46
KCNA3P22001 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.91■□□□□ 0.46
KCNA3P22001 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KCNA3P22001 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
KCNA3P22001 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KCNA3P22001 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KCNA3P22001 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
KCNA3P22001 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms