Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MSR1P21757 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.26□□□□□ -0.29
MSR1P21757 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.25□□□□□ -0.29
MSR1P21757 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
MSR1P21757 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MSR1P21757 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.25□□□□□ -0.29
MSR1P21757 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.25□□□□□ -0.29
MSR1P21757 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MSR1P21757 AC113367.3-201ENST00000508316 1912 ntBASIC13.25□□□□□ -0.29
MSR1P21757 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.25□□□□□ -0.29
MSR1P21757 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MSR1P21757 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.25□□□□□ -0.29
MSR1P21757 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MSR1P21757 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.25□□□□□ -0.29
MSR1P21757 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
MSR1P21757 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.25□□□□□ -0.29
MSR1P21757 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MSR1P21757 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.25□□□□□ -0.29
MSR1P21757 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MSR1P21757 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.25□□□□□ -0.29
MSR1P21757 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MSR1P21757 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MSR1P21757 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MSR1P21757 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
MSR1P21757 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
MSR1P21757 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
MSR1P21757 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.25□□□□□ -0.29
MSR1P21757 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.25□□□□□ -0.29
MSR1P21757 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
MSR1P21757 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.25□□□□□ -0.29
MSR1P21757 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.25□□□□□ -0.29
MSR1P21757 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.25□□□□□ -0.29
MSR1P21757 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.25□□□□□ -0.29
MSR1P21757 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MSR1P21757 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.25□□□□□ -0.29
MSR1P21757 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.25□□□□□ -0.29
MSR1P21757 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MSR1P21757 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.25□□□□□ -0.29
MSR1P21757 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MSR1P21757 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MSR1P21757 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MSR1P21757 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
MSR1P21757 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MSR1P21757 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.25□□□□□ -0.29
MSR1P21757 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
MSR1P21757 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.25□□□□□ -0.29
MSR1P21757 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MSR1P21757 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
MSR1P21757 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MSR1P21757 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MSR1P21757 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
MSR1P21757 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
MSR1P21757 AL009178.2-201ENST00000597278 2719 ntBASIC13.25□□□□□ -0.29
MSR1P21757 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
MSR1P21757 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
MSR1P21757 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
MSR1P21757 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
MSR1P21757 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
MSR1P21757 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MSR1P21757 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
MSR1P21757 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.24□□□□□ -0.29
MSR1P21757 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MSR1P21757 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MSR1P21757 AC126335.2-201ENST00000623362 4637 ntBASIC13.24□□□□□ -0.29
MSR1P21757 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MSR1P21757 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
MSR1P21757 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.24□□□□□ -0.29
MSR1P21757 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
MSR1P21757 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
MSR1P21757 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.24□□□□□ -0.29
MSR1P21757 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MSR1P21757 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
MSR1P21757 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.24□□□□□ -0.29
MSR1P21757 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.24□□□□□ -0.29
MSR1P21757 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
MSR1P21757 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
MSR1P21757 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
MSR1P21757 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MSR1P21757 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.24□□□□□ -0.29
MSR1P21757 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MSR1P21757 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
MSR1P21757 AC098614.1-201ENST00000368528 745 ntBASIC13.24□□□□□ -0.29
MSR1P21757 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MSR1P21757 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
MSR1P21757 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MSR1P21757 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.24□□□□□ -0.29
MSR1P21757 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.24□□□□□ -0.29
MSR1P21757 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.24□□□□□ -0.29
MSR1P21757 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
MSR1P21757 PTP4A1P2-201ENST00000546033 454 ntBASIC13.24□□□□□ -0.29
MSR1P21757 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
MSR1P21757 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.24□□□□□ -0.29
MSR1P21757 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
MSR1P21757 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
MSR1P21757 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.24□□□□□ -0.29
MSR1P21757 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.24□□□□□ -0.29
MSR1P21757 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
MSR1P21757 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
MSR1P21757 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.24□□□□□ -0.29
MSR1P21757 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms