Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP2B1P20020 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
ATP2B1P20020 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP2B1P20020 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC17.3■□□□□ 0.36
ATP2B1P20020 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
ATP2B1P20020 AL390755.1-201ENST00000623716 2027 ntBASIC17.3■□□□□ 0.36
ATP2B1P20020 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP2B1P20020 KRT8P14-201ENST00000414254 1442 ntBASIC17.3■□□□□ 0.36
ATP2B1P20020 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP2B1P20020 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2B1P20020 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2B1P20020 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
ATP2B1P20020 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2B1P20020 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP2B1P20020 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2B1P20020 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.29■□□□□ 0.36
ATP2B1P20020 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2B1P20020 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2B1P20020 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2B1P20020 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2B1P20020 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP2B1P20020 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP2B1P20020 UCKL1-AS1-201ENST00000623569 3602 ntBASIC17.29■□□□□ 0.36
ATP2B1P20020 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
ATP2B1P20020 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2B1P20020 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC17.29■□□□□ 0.36
ATP2B1P20020 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2B1P20020 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2B1P20020 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP2B1P20020 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.29■□□□□ 0.36
ATP2B1P20020 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.29■□□□□ 0.36
ATP2B1P20020 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.29■□□□□ 0.36
ATP2B1P20020 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.29■□□□□ 0.36
ATP2B1P20020 AC026434.2-201ENST00000506094 1078 ntBASIC17.29■□□□□ 0.36
ATP2B1P20020 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP2B1P20020 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.29■□□□□ 0.36
ATP2B1P20020 TDH-203ENST00000531764 1110 ntBASIC17.29■□□□□ 0.36
ATP2B1P20020 AL596325.1-201ENST00000563991 1082 ntBASIC17.29■□□□□ 0.36
ATP2B1P20020 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.29■□□□□ 0.36
ATP2B1P20020 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.29■□□□□ 0.36
ATP2B1P20020 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.29■□□□□ 0.36
ATP2B1P20020 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.29■□□□□ 0.36
ATP2B1P20020 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.29■□□□□ 0.36
ATP2B1P20020 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2B1P20020 AC010319.3-201ENST00000597028 470 ntBASIC17.29■□□□□ 0.36
ATP2B1P20020 AP005019.2-201ENST00000615104 511 ntBASIC17.29■□□□□ 0.36
ATP2B1P20020 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
ATP2B1P20020 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.29■□□□□ 0.36
ATP2B1P20020 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.29■□□□□ 0.36
ATP2B1P20020 AL358472.5-202ENST00000641448 1267 ntBASIC17.29■□□□□ 0.36
ATP2B1P20020 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2B1P20020 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP2B1P20020 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2B1P20020 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
ATP2B1P20020 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2B1P20020 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC17.29■□□□□ 0.36
ATP2B1P20020 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2B1P20020 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2B1P20020 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP2B1P20020 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2B1P20020 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ATP2B1P20020 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2B1P20020 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2B1P20020 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2B1P20020 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2B1P20020 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP2B1P20020 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP2B1P20020 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP2B1P20020 AC097359.2-201ENST00000604992 2389 ntBASIC17.29■□□□□ 0.36
ATP2B1P20020 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP2B1P20020 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
ATP2B1P20020 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ATP2B1P20020 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2B1P20020 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2B1P20020 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2B1P20020 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC17.28■□□□□ 0.36
ATP2B1P20020 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.28■□□□□ 0.36
ATP2B1P20020 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.28■□□□□ 0.36
ATP2B1P20020 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2B1P20020 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
ATP2B1P20020 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2B1P20020 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC17.28■□□□□ 0.36
ATP2B1P20020 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2B1P20020 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC17.28■□□□□ 0.36
ATP2B1P20020 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2B1P20020 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2B1P20020 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2B1P20020 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2B1P20020 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
ATP2B1P20020 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ATP2B1P20020 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
ATP2B1P20020 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2B1P20020 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2B1P20020 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.28■□□□□ 0.36
ATP2B1P20020 EIF3FP3-201ENST00000434851 1086 ntBASIC17.28■□□□□ 0.36
ATP2B1P20020 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2B1P20020 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ATP2B1P20020 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2B1P20020 AC022616.1-201ENST00000518688 554 ntBASIC17.28■□□□□ 0.36
ATP2B1P20020 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms