Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ERCC3P19447 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.31■□□□□ 0.36
ERCC3P19447 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ERCC3P19447 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ERCC3P19447 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ERCC3P19447 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ERCC3P19447 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.31■□□□□ 0.36
ERCC3P19447 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ERCC3P19447 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC17.31■□□□□ 0.36
ERCC3P19447 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC17.31■□□□□ 0.36
ERCC3P19447 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ERCC3P19447 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ERCC3P19447 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ERCC3P19447 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ERCC3P19447 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.31■□□□□ 0.36
ERCC3P19447 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ERCC3P19447 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC17.31■□□□□ 0.36
ERCC3P19447 AL360270.3-201ENST00000609118 1348 ntBASIC17.31■□□□□ 0.36
ERCC3P19447 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ERCC3P19447 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ERCC3P19447 DPM3-202ENST00000368399 517 ntBASIC17.31■□□□□ 0.36
ERCC3P19447 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ERCC3P19447 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ERCC3P19447 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC17.31■□□□□ 0.36
ERCC3P19447 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC17.31■□□□□ 0.36
ERCC3P19447 RNMTL1P1-201ENST00000454103 560 ntBASIC17.31■□□□□ 0.36
ERCC3P19447 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC17.31■□□□□ 0.36
ERCC3P19447 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ERCC3P19447 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC17.31■□□□□ 0.36
ERCC3P19447 AC245884.6-201ENST00000515672 1067 ntBASIC17.31■□□□□ 0.36
ERCC3P19447 AC022217.1-201ENST00000521069 738 ntBASIC17.31■□□□□ 0.36
ERCC3P19447 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
ERCC3P19447 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC17.31■□□□□ 0.36
ERCC3P19447 AL109954.1-202ENST00000564051 2148 ntBASIC17.31■□□□□ 0.36
ERCC3P19447 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.31■□□□□ 0.36
ERCC3P19447 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC17.31■□□□□ 0.36
ERCC3P19447 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC17.31■□□□□ 0.36
ERCC3P19447 AL023803.2-201ENST00000620080 638 ntBASIC17.31■□□□□ 0.36
ERCC3P19447 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ERCC3P19447 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.31■□□□□ 0.36
ERCC3P19447 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ERCC3P19447 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
ERCC3P19447 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ERCC3P19447 AC112693.3-201ENST00000624819 1983 ntBASIC17.31■□□□□ 0.36
ERCC3P19447 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ERCC3P19447 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.31■□□□□ 0.36
ERCC3P19447 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ERCC3P19447 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC17.31■□□□□ 0.36
ERCC3P19447 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC3P19447 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
ERCC3P19447 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
ERCC3P19447 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC3P19447 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.3■□□□□ 0.36
ERCC3P19447 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC3P19447 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.3■□□□□ 0.36
ERCC3P19447 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC3P19447 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
ERCC3P19447 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.3■□□□□ 0.36
ERCC3P19447 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC3P19447 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC3P19447 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC3P19447 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC3P19447 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC3P19447 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC3P19447 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC3P19447 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.3■□□□□ 0.36
ERCC3P19447 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.3■□□□□ 0.36
ERCC3P19447 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.3■□□□□ 0.36
ERCC3P19447 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.3■□□□□ 0.36
ERCC3P19447 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC17.3■□□□□ 0.36
ERCC3P19447 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.3■□□□□ 0.36
ERCC3P19447 RN7SL774P-201ENST00000577467 290 ntBASIC17.3■□□□□ 0.36
ERCC3P19447 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC17.3■□□□□ 0.36
ERCC3P19447 AL645939.5-201ENST00000606834 243 ntBASIC17.3■□□□□ 0.36
ERCC3P19447 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
ERCC3P19447 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC3P19447 CICP11-201ENST00000434745 2827 ntBASIC17.3■□□□□ 0.36
ERCC3P19447 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC3P19447 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC3P19447 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.3■□□□□ 0.36
ERCC3P19447 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ERCC3P19447 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC17.3■□□□□ 0.36
ERCC3P19447 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC3P19447 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC3P19447 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
ERCC3P19447 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.3■□□□□ 0.36
ERCC3P19447 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC3P19447 AP000593.2-201ENST00000542775 1433 ntBASIC17.3■□□□□ 0.36
ERCC3P19447 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ERCC3P19447 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC3P19447 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC3P19447 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC3P19447 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.29■□□□□ 0.36
ERCC3P19447 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC3P19447 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ERCC3P19447 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC3P19447 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC17.29■□□□□ 0.36
ERCC3P19447 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC3P19447 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ERCC3P19447 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms