Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 SALL4P5-201ENST00000419001 1760 ntBASIC12.36□□□□□ -0.43
CCL3L1P16619 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCL3L1P16619 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.36□□□□□ -0.43
CCL3L1P16619 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCL3L1P16619 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CCL3L1P16619 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.36□□□□□ -0.43
CCL3L1P16619 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCL3L1P16619 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CCL3L1P16619 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.36□□□□□ -0.43
CCL3L1P16619 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
CCL3L1P16619 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CCL3L1P16619 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCL3L1P16619 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CCL3L1P16619 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
CCL3L1P16619 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.36□□□□□ -0.43
CCL3L1P16619 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC12.36□□□□□ -0.43
CCL3L1P16619 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCL3L1P16619 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC12.36□□□□□ -0.43
CCL3L1P16619 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CCL3L1P16619 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
CCL3L1P16619 AC007969.1-201ENST00000433675 447 ntBASIC12.36□□□□□ -0.43
CCL3L1P16619 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CCL3L1P16619 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC12.36□□□□□ -0.43
CCL3L1P16619 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC12.36□□□□□ -0.43
CCL3L1P16619 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.36□□□□□ -0.43
CCL3L1P16619 CTBP2P5-201ENST00000454986 1264 ntBASIC12.36□□□□□ -0.43
CCL3L1P16619 ACA64.2-201ENST00000459014 129 ntBASIC12.36□□□□□ -0.43
CCL3L1P16619 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
CCL3L1P16619 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC12.36□□□□□ -0.43
CCL3L1P16619 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC12.36□□□□□ -0.43
CCL3L1P16619 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC12.36□□□□□ -0.43
CCL3L1P16619 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCL3L1P16619 SNX29P1-201ENST00000548357 1007 ntBASIC12.36□□□□□ -0.43
CCL3L1P16619 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.36□□□□□ -0.43
CCL3L1P16619 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.36□□□□□ -0.43
CCL3L1P16619 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC12.36□□□□□ -0.43
CCL3L1P16619 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.36□□□□□ -0.43
CCL3L1P16619 RPS24-214ENST00000613865 538 ntTSL 5 BASIC12.36□□□□□ -0.43
CCL3L1P16619 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.36□□□□□ -0.43
CCL3L1P16619 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCL3L1P16619 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.36□□□□□ -0.43
CCL3L1P16619 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCL3L1P16619 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCL3L1P16619 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCL3L1P16619 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCL3L1P16619 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCL3L1P16619 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCL3L1P16619 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCL3L1P16619 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCL3L1P16619 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
CCL3L1P16619 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.36□□□□□ -0.43
CCL3L1P16619 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
CCL3L1P16619 AC020910.5-201ENST00000623668 1865 ntBASIC12.36□□□□□ -0.43
CCL3L1P16619 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CCL3L1P16619 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CCL3L1P16619 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.35□□□□□ -0.43
CCL3L1P16619 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL3L1P16619 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL3L1P16619 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.35□□□□□ -0.43
CCL3L1P16619 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.35□□□□□ -0.43
CCL3L1P16619 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL3L1P16619 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CCL3L1P16619 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC12.35□□□□□ -0.43
CCL3L1P16619 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.35□□□□□ -0.43
CCL3L1P16619 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL3L1P16619 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.35□□□□□ -0.43
CCL3L1P16619 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL3L1P16619 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.35□□□□□ -0.43
CCL3L1P16619 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
CCL3L1P16619 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL3L1P16619 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL3L1P16619 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL3L1P16619 ANKRD19P-201ENST00000338192 862 ntBASIC12.35□□□□□ -0.43
CCL3L1P16619 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CCL3L1P16619 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
CCL3L1P16619 BOLA2P3-201ENST00000404566 256 ntBASIC12.35□□□□□ -0.43
CCL3L1P16619 MIR1909-201ENST00000411312 80 ntBASIC12.35□□□□□ -0.43
CCL3L1P16619 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.35□□□□□ -0.43
CCL3L1P16619 CNN2P8-201ENST00000421872 913 ntBASIC12.35□□□□□ -0.43
CCL3L1P16619 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC12.35□□□□□ -0.43
CCL3L1P16619 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.35□□□□□ -0.43
CCL3L1P16619 KLF2P4-201ENST00000451959 1225 ntBASIC12.35□□□□□ -0.43
CCL3L1P16619 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.35□□□□□ -0.43
CCL3L1P16619 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
CCL3L1P16619 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12.35□□□□□ -0.43
CCL3L1P16619 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC12.35□□□□□ -0.43
CCL3L1P16619 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC12.35□□□□□ -0.43
CCL3L1P16619 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.35□□□□□ -0.43
CCL3L1P16619 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC12.35□□□□□ -0.43
CCL3L1P16619 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CCL3L1P16619 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL3L1P16619 AC138466.3-201ENST00000619983 221 ntBASIC12.35□□□□□ -0.43
CCL3L1P16619 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.35□□□□□ -0.43
CCL3L1P16619 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.35□□□□□ -0.43
CCL3L1P16619 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
CCL3L1P16619 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CCL3L1P16619 INE2-201ENST00000630399 1874 ntBASIC12.35□□□□□ -0.43
CCL3L1P16619 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL3L1P16619 AL354989.2-201ENST00000435838 1540 ntBASIC12.35□□□□□ -0.43
CCL3L1P16619 AC011840.2-201ENST00000563063 1520 ntBASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms