Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NCK1P16333 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NCK1P16333 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NCK1P16333 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NCK1P16333 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NCK1P16333 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NCK1P16333 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NCK1P16333 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NCK1P16333 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NCK1P16333 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.18□□□□□ -0.14
NCK1P16333 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
NCK1P16333 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NCK1P16333 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NCK1P16333 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
NCK1P16333 KRT8P24-201ENST00000560290 1559 ntBASIC14.18□□□□□ -0.14
NCK1P16333 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.18□□□□□ -0.14
NCK1P16333 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NCK1P16333 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
NCK1P16333 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NCK1P16333 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NCK1P16333 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NCK1P16333 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NCK1P16333 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.18□□□□□ -0.14
NCK1P16333 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NCK1P16333 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.18□□□□□ -0.14
NCK1P16333 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NCK1P16333 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NCK1P16333 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NCK1P16333 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NCK1P16333 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NCK1P16333 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
NCK1P16333 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NCK1P16333 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
NCK1P16333 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.18□□□□□ -0.14
NCK1P16333 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.18□□□□□ -0.14
NCK1P16333 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.18□□□□□ -0.14
NCK1P16333 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.18□□□□□ -0.14
NCK1P16333 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.18□□□□□ -0.14
NCK1P16333 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.18□□□□□ -0.14
NCK1P16333 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NCK1P16333 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NCK1P16333 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.18□□□□□ -0.14
NCK1P16333 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.18□□□□□ -0.14
NCK1P16333 AC074044.1-201ENST00000609673 707 ntBASIC14.18□□□□□ -0.14
NCK1P16333 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
NCK1P16333 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.18□□□□□ -0.14
NCK1P16333 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NCK1P16333 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NCK1P16333 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NCK1P16333 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
NCK1P16333 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
NCK1P16333 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
NCK1P16333 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NCK1P16333 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
NCK1P16333 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NCK1P16333 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
NCK1P16333 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NCK1P16333 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NCK1P16333 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NCK1P16333 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.18□□□□□ -0.14
NCK1P16333 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
NCK1P16333 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NCK1P16333 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NCK1P16333 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NCK1P16333 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NCK1P16333 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.17□□□□□ -0.14
NCK1P16333 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NCK1P16333 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NCK1P16333 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.17□□□□□ -0.14
NCK1P16333 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NCK1P16333 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.17□□□□□ -0.14
NCK1P16333 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NCK1P16333 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.17□□□□□ -0.14
NCK1P16333 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NCK1P16333 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
NCK1P16333 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NCK1P16333 KRT8P14-201ENST00000414254 1442 ntBASIC14.17□□□□□ -0.14
NCK1P16333 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.17□□□□□ -0.14
NCK1P16333 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NCK1P16333 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NCK1P16333 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.17□□□□□ -0.14
NCK1P16333 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.17□□□□□ -0.14
NCK1P16333 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NCK1P16333 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.17□□□□□ -0.14
NCK1P16333 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.17□□□□□ -0.14
NCK1P16333 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.17□□□□□ -0.14
NCK1P16333 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NCK1P16333 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NCK1P16333 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NCK1P16333 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NCK1P16333 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NCK1P16333 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.17□□□□□ -0.14
NCK1P16333 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NCK1P16333 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.17□□□□□ -0.14
NCK1P16333 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.17□□□□□ -0.14
NCK1P16333 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.17□□□□□ -0.14
NCK1P16333 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.17□□□□□ -0.14
NCK1P16333 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.17□□□□□ -0.14
NCK1P16333 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.17□□□□□ -0.14
NCK1P16333 AC005829.1-201ENST00000570002 483 ntBASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms