Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.67■□□□□ 0.26
RARBP10826 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RARBP10826 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
RARBP10826 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RARBP10826 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.67■□□□□ 0.26
RARBP10826 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RARBP10826 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RARBP10826 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RARBP10826 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.66■□□□□ 0.26
RARBP10826 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RARBP10826 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RARBP10826 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RARBP10826 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RARBP10826 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RARBP10826 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RARBP10826 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RARBP10826 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
RARBP10826 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RARBP10826 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
RARBP10826 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
RARBP10826 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.66■□□□□ 0.26
RARBP10826 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RARBP10826 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RARBP10826 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RARBP10826 OR2K2-202ENST00000374428 1038 ntBASIC16.66■□□□□ 0.26
RARBP10826 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC16.66■□□□□ 0.26
RARBP10826 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RARBP10826 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RARBP10826 RPS9P1-201ENST00000419943 583 ntBASIC16.66■□□□□ 0.26
RARBP10826 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RARBP10826 HPGD-203ENST00000422112 805 ntTSL 2 BASIC16.66■□□□□ 0.26
RARBP10826 RPL8P2-201ENST00000430538 502 ntBASIC16.66■□□□□ 0.26
RARBP10826 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RARBP10826 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.66■□□□□ 0.26
RARBP10826 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.66■□□□□ 0.26
RARBP10826 TPM1-223ENST00000560445 485 ntTSL 3 BASIC16.66■□□□□ 0.26
RARBP10826 AL031713.1-201ENST00000564813 661 ntBASIC16.66■□□□□ 0.26
RARBP10826 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.66■□□□□ 0.26
RARBP10826 AL157813.1-201ENST00000612996 587 ntBASIC16.66■□□□□ 0.26
RARBP10826 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.66■□□□□ 0.26
RARBP10826 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RARBP10826 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RARBP10826 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RARBP10826 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RARBP10826 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RARBP10826 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RARBP10826 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RARBP10826 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.66■□□□□ 0.26
RARBP10826 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RARBP10826 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.66■□□□□ 0.26
RARBP10826 STK26-204ENST00000481105 1835 ntTSL 2 BASIC16.66■□□□□ 0.26
RARBP10826 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RARBP10826 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RARBP10826 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RARBP10826 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RARBP10826 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RARBP10826 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RARBP10826 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RARBP10826 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RARBP10826 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RARBP10826 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RARBP10826 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.65■□□□□ 0.26
RARBP10826 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RARBP10826 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RARBP10826 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RARBP10826 TLE1P1-201ENST00000422965 589 ntBASIC16.65■□□□□ 0.26
RARBP10826 AL592076.1-201ENST00000424448 303 ntBASIC16.65■□□□□ 0.26
RARBP10826 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC16.65■□□□□ 0.26
RARBP10826 AC026320.2-201ENST00000434379 478 ntBASIC16.65■□□□□ 0.26
RARBP10826 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC16.65■□□□□ 0.26
RARBP10826 RPL7P35-201ENST00000446943 740 ntBASIC16.65■□□□□ 0.26
RARBP10826 ALG3P1-201ENST00000508806 1114 ntBASIC16.65■□□□□ 0.26
RARBP10826 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC16.65■□□□□ 0.26
RARBP10826 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC16.65■□□□□ 0.26
RARBP10826 AL109837.1-201ENST00000603272 613 ntBASIC16.65■□□□□ 0.26
RARBP10826 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC16.65■□□□□ 0.26
RARBP10826 AC027601.3-201ENST00000622907 509 ntBASIC16.65■□□□□ 0.26
RARBP10826 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RARBP10826 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RARBP10826 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RARBP10826 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC16.65■□□□□ 0.26
RARBP10826 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RARBP10826 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RARBP10826 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RARBP10826 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
RARBP10826 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RARBP10826 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RARBP10826 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RARBP10826 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RARBP10826 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RARBP10826 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RARBP10826 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RARBP10826 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.65■□□□□ 0.26
RARBP10826 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.65■□□□□ 0.26
RARBP10826 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.65■□□□□ 0.26
RARBP10826 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RARBP10826 CAP2P1-201ENST00000557743 1390 ntBASIC16.64■□□□□ 0.26
RARBP10826 AP005117.1-202ENST00000581724 1908 ntBASIC16.64■□□□□ 0.26
RARBP10826 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
RARBP10826 AC144831.1-201ENST00000573312 2656 ntBASIC16.64■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms