Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 BRI3BPP1-201ENST00000594224 787 ntBASIC16.26■□□□□ 0.19
CCDC172P0C7W6 AC116165.1-201ENST00000611806 668 ntBASIC16.26■□□□□ 0.19
CCDC172P0C7W6 AL662799.1-202ENST00000614205 422 ntBASIC16.26■□□□□ 0.19
CCDC172P0C7W6 AC007431.3-201ENST00000623221 587 ntBASIC16.26■□□□□ 0.19
CCDC172P0C7W6 PRSS30P-206ENST00000641773 873 ntBASIC16.26■□□□□ 0.19
CCDC172P0C7W6 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 ST20-AS1-201ENST00000560255 4223 ntBASIC16.25■□□□□ 0.19
CCDC172P0C7W6 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 TPT1P11-201ENST00000458482 498 ntBASIC16.25■□□□□ 0.19
CCDC172P0C7W6 AC093214.1-201ENST00000511688 1107 ntBASIC16.25■□□□□ 0.19
CCDC172P0C7W6 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 RNA5SP421-201ENST00000516864 134 ntBASIC16.25■□□□□ 0.19
CCDC172P0C7W6 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 AC099568.2-201ENST00000609194 695 ntBASIC16.25■□□□□ 0.19
CCDC172P0C7W6 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 DKFZP434A062-201ENST00000573103 5021 ntBASIC16.25■□□□□ 0.19
CCDC172P0C7W6 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 AC087386.2-201ENST00000623212 4637 ntBASIC16.25■□□□□ 0.19
CCDC172P0C7W6 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC172P0C7W6 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC172P0C7W6 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
CCDC172P0C7W6 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC172P0C7W6 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC172P0C7W6 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.24■□□□□ 0.19
CCDC172P0C7W6 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC172P0C7W6 AC027601.5-201ENST00000624065 2482 ntBASIC16.24■□□□□ 0.19
CCDC172P0C7W6 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC172P0C7W6 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC172P0C7W6 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC172P0C7W6 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CCDC172P0C7W6 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC172P0C7W6 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
CCDC172P0C7W6 BX640514.1-201ENST00000583223 1918 ntBASIC16.24■□□□□ 0.19
CCDC172P0C7W6 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC172P0C7W6 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC172P0C7W6 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CCDC172P0C7W6 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC172P0C7W6 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.24■□□□□ 0.19
CCDC172P0C7W6 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC172P0C7W6 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CCDC172P0C7W6 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms