Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CYP3A4P08684 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.66■□□□□ 0.26
CYP3A4P08684 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CYP3A4P08684 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CYP3A4P08684 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC16.66■□□□□ 0.26
CYP3A4P08684 MYADML-201ENST00000474610 2147 ntBASIC16.66■□□□□ 0.26
CYP3A4P08684 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CYP3A4P08684 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CYP3A4P08684 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CYP3A4P08684 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.66■□□□□ 0.26
CYP3A4P08684 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.66■□□□□ 0.26
CYP3A4P08684 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
CYP3A4P08684 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.66■□□□□ 0.26
CYP3A4P08684 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CYP3A4P08684 AGER-203ENST00000375065 665 ntTSL 2 BASIC16.66■□□□□ 0.26
CYP3A4P08684 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CYP3A4P08684 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CYP3A4P08684 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CYP3A4P08684 TPT1P11-201ENST00000458482 498 ntBASIC16.66■□□□□ 0.26
CYP3A4P08684 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC16.66■□□□□ 0.26
CYP3A4P08684 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CYP3A4P08684 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.66■□□□□ 0.26
CYP3A4P08684 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.66■□□□□ 0.26
CYP3A4P08684 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.66■□□□□ 0.26
CYP3A4P08684 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.66■□□□□ 0.26
CYP3A4P08684 AL451050.2-201ENST00000606967 682 ntBASIC16.66■□□□□ 0.26
CYP3A4P08684 GPR182-203ENST00000622922 591 ntBASIC16.66■□□□□ 0.26
CYP3A4P08684 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.66■□□□□ 0.26
CYP3A4P08684 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CYP3A4P08684 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CYP3A4P08684 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
CYP3A4P08684 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.66■□□□□ 0.26
CYP3A4P08684 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CYP3A4P08684 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
CYP3A4P08684 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CYP3A4P08684 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.66■□□□□ 0.26
CYP3A4P08684 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CYP3A4P08684 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.66■□□□□ 0.26
CYP3A4P08684 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CYP3A4P08684 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.66■□□□□ 0.26
CYP3A4P08684 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CYP3A4P08684 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CYP3A4P08684 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CYP3A4P08684 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.65■□□□□ 0.26
CYP3A4P08684 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.65■□□□□ 0.26
CYP3A4P08684 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CYP3A4P08684 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CYP3A4P08684 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CYP3A4P08684 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CYP3A4P08684 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CYP3A4P08684 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CYP3A4P08684 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CYP3A4P08684 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.65■□□□□ 0.26
CYP3A4P08684 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CYP3A4P08684 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CYP3A4P08684 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.65■□□□□ 0.26
CYP3A4P08684 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CYP3A4P08684 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CYP3A4P08684 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CYP3A4P08684 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CYP3A4P08684 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CYP3A4P08684 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CYP3A4P08684 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CYP3A4P08684 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.65■□□□□ 0.26
CYP3A4P08684 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CYP3A4P08684 AC104073.2-201ENST00000453737 312 ntBASIC16.65■□□□□ 0.26
CYP3A4P08684 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.65■□□□□ 0.26
CYP3A4P08684 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.65■□□□□ 0.26
CYP3A4P08684 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.65■□□□□ 0.26
CYP3A4P08684 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.65■□□□□ 0.26
CYP3A4P08684 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.65■□□□□ 0.26
CYP3A4P08684 MIR3615-201ENST00000581999 87 ntBASIC16.65■□□□□ 0.26
CYP3A4P08684 AC005962.1-201ENST00000584100 773 ntBASIC16.65■□□□□ 0.26
CYP3A4P08684 AC244093.1-201ENST00000610837 814 ntBASIC16.65■□□□□ 0.26
CYP3A4P08684 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CYP3A4P08684 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.65■□□□□ 0.26
CYP3A4P08684 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CYP3A4P08684 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.65■□□□□ 0.26
CYP3A4P08684 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CYP3A4P08684 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CYP3A4P08684 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CYP3A4P08684 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CYP3A4P08684 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CYP3A4P08684 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CYP3A4P08684 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CYP3A4P08684 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CYP3A4P08684 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.65■□□□□ 0.26
CYP3A4P08684 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CYP3A4P08684 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CYP3A4P08684 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CYP3A4P08684 FAM90A7P-201ENST00000382628 1395 ntBASIC16.64■□□□□ 0.26
CYP3A4P08684 FAM90A23P-201ENST00000400136 1395 ntBASIC16.64■□□□□ 0.26
CYP3A4P08684 AC113367.3-201ENST00000508316 1912 ntBASIC16.64■□□□□ 0.26
CYP3A4P08684 MBLAC2-202ENST00000514906 1936 ntBASIC16.64■□□□□ 0.26
CYP3A4P08684 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CYP3A4P08684 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CYP3A4P08684 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CYP3A4P08684 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CYP3A4P08684 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CYP3A4P08684 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms