Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-AP01891 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
HLA-AP01891 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-AP01891 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-AP01891 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
HLA-AP01891 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-AP01891 AC015818.8-201ENST00000587907 1519 ntBASIC12.7□□□□□ -0.38
HLA-AP01891 AC015909.5-201ENST00000624336 2266 ntBASIC12.7□□□□□ -0.38
HLA-AP01891 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-AP01891 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-AP01891 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-AP01891 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.7□□□□□ -0.38
HLA-AP01891 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-AP01891 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-AP01891 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
HLA-AP01891 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-AP01891 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.7□□□□□ -0.38
HLA-AP01891 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-AP01891 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
HLA-AP01891 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
HLA-AP01891 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC12.7□□□□□ -0.38
HLA-AP01891 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-AP01891 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
HLA-AP01891 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-AP01891 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
HLA-AP01891 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-AP01891 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-AP01891 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-AP01891 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-AP01891 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-AP01891 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-AP01891 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-AP01891 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
HLA-AP01891 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
HLA-AP01891 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
HLA-AP01891 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-AP01891 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-AP01891 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
HLA-AP01891 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-AP01891 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
HLA-AP01891 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.69□□□□□ -0.38
HLA-AP01891 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-AP01891 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
HLA-AP01891 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-AP01891 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
HLA-AP01891 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-AP01891 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.69□□□□□ -0.38
HLA-AP01891 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC12.69□□□□□ -0.38
HLA-AP01891 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
HLA-AP01891 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-AP01891 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-AP01891 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
HLA-AP01891 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
HLA-AP01891 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-AP01891 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-AP01891 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC12.69□□□□□ -0.38
HLA-AP01891 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC12.69□□□□□ -0.38
HLA-AP01891 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-AP01891 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
HLA-AP01891 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-AP01891 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.69□□□□□ -0.38
HLA-AP01891 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.69□□□□□ -0.38
HLA-AP01891 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.69□□□□□ -0.38
HLA-AP01891 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-AP01891 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.69□□□□□ -0.38
HLA-AP01891 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-AP01891 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
HLA-AP01891 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-AP01891 CEND1P1-201ENST00000451006 455 ntBASIC12.69□□□□□ -0.38
HLA-AP01891 TIMM8BP1-201ENST00000452384 211 ntBASIC12.69□□□□□ -0.38
HLA-AP01891 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC12.69□□□□□ -0.38
HLA-AP01891 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
HLA-AP01891 SUOX-214ENST00000551841 906 ntTSL 3 BASIC12.69□□□□□ -0.38
HLA-AP01891 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.69□□□□□ -0.38
HLA-AP01891 AL135744.1-201ENST00000565098 629 ntBASIC12.69□□□□□ -0.38
HLA-AP01891 RARRES2P8-201ENST00000566335 367 ntBASIC12.69□□□□□ -0.38
HLA-AP01891 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-AP01891 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.69□□□□□ -0.38
HLA-AP01891 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.69□□□□□ -0.38
HLA-AP01891 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
HLA-AP01891 AL645728.2-202ENST00000641679 227 ntBASIC12.69□□□□□ -0.38
HLA-AP01891 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
HLA-AP01891 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-AP01891 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.69□□□□□ -0.38
HLA-AP01891 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-AP01891 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-AP01891 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-AP01891 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC12.69□□□□□ -0.38
HLA-AP01891 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.69□□□□□ -0.38
HLA-AP01891 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-AP01891 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-AP01891 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
HLA-AP01891 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-AP01891 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-AP01891 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
HLA-AP01891 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
HLA-AP01891 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC12.69□□□□□ -0.38
HLA-AP01891 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
HLA-AP01891 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-AP01891 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms