Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
IFNA1P01562 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
IFNA1P01562 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC11.88□□□□□ -0.51
IFNA1P01562 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC11.88□□□□□ -0.51
IFNA1P01562 RNA5SP410-201ENST00000516285 106 ntBASIC11.88□□□□□ -0.51
IFNA1P01562 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
IFNA1P01562 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
IFNA1P01562 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC11.88□□□□□ -0.51
IFNA1P01562 RPL28-209ENST00000560055 670 ntTSL 3 BASIC11.88□□□□□ -0.51
IFNA1P01562 COQ9-214ENST00000567933 882 ntTSL 3 BASIC11.88□□□□□ -0.51
IFNA1P01562 AL732292.2-201ENST00000609649 430 ntBASIC11.88□□□□□ -0.51
IFNA1P01562 PID1-202ENST00000392054 2745 ntTSL 2 BASIC11.88□□□□□ -0.51
IFNA1P01562 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
IFNA1P01562 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
IFNA1P01562 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
IFNA1P01562 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
IFNA1P01562 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
IFNA1P01562 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
IFNA1P01562 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC11.88□□□□□ -0.51
IFNA1P01562 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
IFNA1P01562 AL023775.1-201ENST00000454907 1746 ntBASIC11.88□□□□□ -0.51
IFNA1P01562 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC11.88□□□□□ -0.51
IFNA1P01562 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
IFNA1P01562 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC11.88□□□□□ -0.51
IFNA1P01562 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
IFNA1P01562 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
IFNA1P01562 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
IFNA1P01562 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
IFNA1P01562 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
IFNA1P01562 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
IFNA1P01562 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
IFNA1P01562 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
IFNA1P01562 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
IFNA1P01562 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
IFNA1P01562 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC11.87□□□□□ -0.51
IFNA1P01562 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC11.87□□□□□ -0.51
IFNA1P01562 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
IFNA1P01562 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
IFNA1P01562 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC11.87□□□□□ -0.51
IFNA1P01562 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC11.87□□□□□ -0.51
IFNA1P01562 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
IFNA1P01562 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
IFNA1P01562 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC11.87□□□□□ -0.51
IFNA1P01562 NAV1-203ENST00000367302 9685 ntTSL 5 BASIC11.87□□□□□ -0.51
IFNA1P01562 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
IFNA1P01562 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
IFNA1P01562 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
IFNA1P01562 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
IFNA1P01562 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC11.87□□□□□ -0.51
IFNA1P01562 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
IFNA1P01562 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
IFNA1P01562 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC11.87□□□□□ -0.51
IFNA1P01562 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
IFNA1P01562 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
IFNA1P01562 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
IFNA1P01562 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC11.87□□□□□ -0.51
IFNA1P01562 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
IFNA1P01562 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC11.87□□□□□ -0.51
IFNA1P01562 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC11.87□□□□□ -0.51
IFNA1P01562 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
IFNA1P01562 AC105233.2-201ENST00000523697 349 ntBASIC11.87□□□□□ -0.51
IFNA1P01562 AF228730.5-201ENST00000530288 346 ntBASIC11.87□□□□□ -0.51
IFNA1P01562 OR7E14P-202ENST00000530490 1290 ntBASIC11.87□□□□□ -0.51
IFNA1P01562 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC11.87□□□□□ -0.51
IFNA1P01562 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC11.87□□□□□ -0.51
IFNA1P01562 AL161645.1-201ENST00000622716 1255 ntBASIC11.87□□□□□ -0.51
IFNA1P01562 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC11.87□□□□□ -0.51
IFNA1P01562 FAM90A12P-201ENST00000519497 2375 ntBASIC11.87□□□□□ -0.51
IFNA1P01562 FAM90A24P-201ENST00000520792 2369 ntBASIC11.87□□□□□ -0.51
IFNA1P01562 AC083964.2-201ENST00000623988 2396 ntBASIC11.87□□□□□ -0.51
IFNA1P01562 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC11.87□□□□□ -0.51
IFNA1P01562 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
IFNA1P01562 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
IFNA1P01562 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
IFNA1P01562 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
IFNA1P01562 NBPF12-208ENST00000617931 7061 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
IFNA1P01562 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC11.87□□□□□ -0.51
IFNA1P01562 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
IFNA1P01562 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
IFNA1P01562 NARF-206ENST00000457415 1668 ntTSL 5 BASIC11.87□□□□□ -0.51
IFNA1P01562 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
IFNA1P01562 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
IFNA1P01562 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
IFNA1P01562 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
IFNA1P01562 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
IFNA1P01562 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC11.87□□□□□ -0.51
IFNA1P01562 TBL1X-206ENST00000424279 5451 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
IFNA1P01562 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
IFNA1P01562 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
IFNA1P01562 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
IFNA1P01562 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC11.86□□□□□ -0.51
IFNA1P01562 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
IFNA1P01562 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
IFNA1P01562 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
IFNA1P01562 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC11.86□□□□□ -0.51
IFNA1P01562 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
IFNA1P01562 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
IFNA1P01562 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
IFNA1P01562 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
IFNA1P01562 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms