Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC21.75■■□□□ 1.07
RAPGEF3O95398 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC21.75■■□□□ 1.07
RAPGEF3O95398 OR10N1P-201ENST00000392758 869 ntBASIC21.75■■□□□ 1.07
RAPGEF3O95398 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RAPGEF3O95398 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC21.75■■□□□ 1.07
RAPGEF3O95398 AL512599.1-201ENST00000430724 685 ntBASIC21.75■■□□□ 1.07
RAPGEF3O95398 CHCHD2P2-201ENST00000503744 321 ntBASIC21.75■■□□□ 1.07
RAPGEF3O95398 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC21.75■■□□□ 1.07
RAPGEF3O95398 DUT-207ENST00000559416 635 ntTSL 2 BASIC21.75■■□□□ 1.07
RAPGEF3O95398 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC21.75■■□□□ 1.07
RAPGEF3O95398 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC21.75■■□□□ 1.07
RAPGEF3O95398 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RAPGEF3O95398 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC21.75■■□□□ 1.07
RAPGEF3O95398 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC21.75■■□□□ 1.07
RAPGEF3O95398 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC21.75■■□□□ 1.07
RAPGEF3O95398 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RAPGEF3O95398 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC21.75■■□□□ 1.07
RAPGEF3O95398 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC21.75■■□□□ 1.07
RAPGEF3O95398 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
RAPGEF3O95398 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RAPGEF3O95398 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
RAPGEF3O95398 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC21.75■■□□□ 1.07
RAPGEF3O95398 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
RAPGEF3O95398 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RAPGEF3O95398 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC21.75■■□□□ 1.07
RAPGEF3O95398 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RAPGEF3O95398 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RAPGEF3O95398 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAPGEF3O95398 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC21.74■■□□□ 1.07
RAPGEF3O95398 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAPGEF3O95398 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAPGEF3O95398 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
RAPGEF3O95398 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RAPGEF3O95398 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAPGEF3O95398 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAPGEF3O95398 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAPGEF3O95398 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
RAPGEF3O95398 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC21.74■■□□□ 1.07
RAPGEF3O95398 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RAPGEF3O95398 AC092896.1-201ENST00000465850 380 ntBASIC21.74■■□□□ 1.07
RAPGEF3O95398 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
RAPGEF3O95398 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC21.74■■□□□ 1.07
RAPGEF3O95398 RN7SL767P-201ENST00000493013 295 ntBASIC21.74■■□□□ 1.07
RAPGEF3O95398 SEPHS2P1-201ENST00000511618 1162 ntBASIC21.74■■□□□ 1.07
RAPGEF3O95398 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RAPGEF3O95398 F11R-204ENST00000537746 1245 ntTSL 2 BASIC21.74■■□□□ 1.07
RAPGEF3O95398 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC21.74■■□□□ 1.07
RAPGEF3O95398 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RAPGEF3O95398 COQ4-204ENST00000608951 781 ntTSL 2 BASIC21.74■■□□□ 1.07
RAPGEF3O95398 AC090510.3-201ENST00000615831 821 ntBASIC21.74■■□□□ 1.07
RAPGEF3O95398 RARS-210ENST00000626454 177 ntTSL 5 BASIC21.74■■□□□ 1.07
RAPGEF3O95398 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC21.74■■□□□ 1.07
RAPGEF3O95398 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC21.74■■□□□ 1.07
RAPGEF3O95398 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAPGEF3O95398 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAPGEF3O95398 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAPGEF3O95398 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAPGEF3O95398 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC21.74■■□□□ 1.07
RAPGEF3O95398 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAPGEF3O95398 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAPGEF3O95398 LINC00528-201ENST00000600723 2160 ntBASIC21.74■■□□□ 1.07
RAPGEF3O95398 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
RAPGEF3O95398 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
RAPGEF3O95398 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RAPGEF3O95398 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RAPGEF3O95398 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAPGEF3O95398 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC21.73■■□□□ 1.07
RAPGEF3O95398 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
RAPGEF3O95398 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAPGEF3O95398 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAPGEF3O95398 PIFO-201ENST00000369737 746 ntTSL 2 BASIC21.73■■□□□ 1.07
RAPGEF3O95398 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RAPGEF3O95398 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAPGEF3O95398 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RAPGEF3O95398 AL080243.1-201ENST00000423293 1060 ntBASIC21.73■■□□□ 1.07
RAPGEF3O95398 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC21.73■■□□□ 1.07
RAPGEF3O95398 RPS18P9-201ENST00000482817 460 ntBASIC21.73■■□□□ 1.07
RAPGEF3O95398 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC21.73■■□□□ 1.07
RAPGEF3O95398 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC21.73■■□□□ 1.07
RAPGEF3O95398 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC21.73■■□□□ 1.07
RAPGEF3O95398 FBXO36P1-201ENST00000579006 471 ntBASIC21.73■■□□□ 1.07
RAPGEF3O95398 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC21.73■■□□□ 1.07
RAPGEF3O95398 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC21.73■■□□□ 1.07
RAPGEF3O95398 AL591471.1-201ENST00000621855 229 ntBASIC21.73■■□□□ 1.07
RAPGEF3O95398 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
RAPGEF3O95398 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAPGEF3O95398 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAPGEF3O95398 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
RAPGEF3O95398 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
RAPGEF3O95398 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAPGEF3O95398 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAPGEF3O95398 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAPGEF3O95398 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAPGEF3O95398 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC21.73■■□□□ 1.07
RAPGEF3O95398 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAPGEF3O95398 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC21.72■■□□□ 1.07
RAPGEF3O95398 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAPGEF3O95398 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
RAPGEF3O95398 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC21.72■■□□□ 1.07
RAPGEF3O95398 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms