Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
BEST1O76090 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
BEST1O76090 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
BEST1O76090 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
BEST1O76090 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.6■□□□□ 0.09
BEST1O76090 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
BEST1O76090 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
BEST1O76090 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
BEST1O76090 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.6■□□□□ 0.09
BEST1O76090 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
BEST1O76090 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
BEST1O76090 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
BEST1O76090 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.6■□□□□ 0.09
BEST1O76090 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
BEST1O76090 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
BEST1O76090 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.6■□□□□ 0.09
BEST1O76090 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.6■□□□□ 0.09
BEST1O76090 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.6■□□□□ 0.09
BEST1O76090 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
BEST1O76090 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
BEST1O76090 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.6■□□□□ 0.09
BEST1O76090 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.6■□□□□ 0.09
BEST1O76090 AC132192.2-201ENST00000596206 1147 ntBASIC15.6■□□□□ 0.09
BEST1O76090 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.6■□□□□ 0.09
BEST1O76090 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
BEST1O76090 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
BEST1O76090 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
BEST1O76090 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
BEST1O76090 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.6■□□□□ 0.09
BEST1O76090 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
BEST1O76090 AL354702.1-201ENST00000442006 1960 ntBASIC15.6■□□□□ 0.09
BEST1O76090 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
BEST1O76090 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.59■□□□□ 0.09
BEST1O76090 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
BEST1O76090 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.59■□□□□ 0.09
BEST1O76090 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
BEST1O76090 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
BEST1O76090 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
BEST1O76090 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
BEST1O76090 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.59■□□□□ 0.09
BEST1O76090 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.59■□□□□ 0.09
BEST1O76090 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
BEST1O76090 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
BEST1O76090 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
BEST1O76090 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
BEST1O76090 AC023824.1-201ENST00000562945 2975 ntBASIC15.59■□□□□ 0.09
BEST1O76090 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.59■□□□□ 0.09
BEST1O76090 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
BEST1O76090 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
BEST1O76090 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
BEST1O76090 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
BEST1O76090 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
BEST1O76090 POM121L10P-201ENST00000436994 1285 ntBASIC15.59■□□□□ 0.09
BEST1O76090 AC006033.1-201ENST00000440505 426 ntBASIC15.59■□□□□ 0.09
BEST1O76090 RNMTL1P1-201ENST00000454103 560 ntBASIC15.59■□□□□ 0.09
BEST1O76090 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.59■□□□□ 0.09
BEST1O76090 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC15.59■□□□□ 0.09
BEST1O76090 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
BEST1O76090 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
BEST1O76090 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.59■□□□□ 0.09
BEST1O76090 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.59■□□□□ 0.09
BEST1O76090 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.59■□□□□ 0.09
BEST1O76090 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
BEST1O76090 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.59■□□□□ 0.09
BEST1O76090 AC008825.2-201ENST00000603374 718 ntBASIC15.59■□□□□ 0.09
BEST1O76090 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
BEST1O76090 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
BEST1O76090 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.59■□□□□ 0.09
BEST1O76090 AC244394.1-201ENST00000435000 1665 ntBASIC15.59■□□□□ 0.09
BEST1O76090 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
BEST1O76090 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.59■□□□□ 0.09
BEST1O76090 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
BEST1O76090 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
BEST1O76090 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.59■□□□□ 0.09
BEST1O76090 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
BEST1O76090 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
BEST1O76090 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.59■□□□□ 0.09
BEST1O76090 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
BEST1O76090 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.58■□□□□ 0.09
BEST1O76090 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
BEST1O76090 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
BEST1O76090 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
BEST1O76090 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
BEST1O76090 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.58■□□□□ 0.09
BEST1O76090 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
BEST1O76090 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.58■□□□□ 0.08
BEST1O76090 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
BEST1O76090 AC103702.1-201ENST00000548801 2630 ntBASIC15.58■□□□□ 0.08
BEST1O76090 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.58■□□□□ 0.08
BEST1O76090 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
BEST1O76090 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
BEST1O76090 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
BEST1O76090 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
BEST1O76090 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.58■□□□□ 0.08
BEST1O76090 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
BEST1O76090 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.58■□□□□ 0.08
BEST1O76090 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
BEST1O76090 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.58■□□□□ 0.08
BEST1O76090 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
BEST1O76090 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms