Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC6.45□□□□□ -1.38
USH2AO75445 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC6.45□□□□□ -1.38
USH2AO75445 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
USH2AO75445 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC6.45□□□□□ -1.38
USH2AO75445 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC6.45□□□□□ -1.38
USH2AO75445 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
USH2AO75445 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
USH2AO75445 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
USH2AO75445 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC6.45□□□□□ -1.38
USH2AO75445 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
USH2AO75445 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
USH2AO75445 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
USH2AO75445 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
USH2AO75445 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
USH2AO75445 GUCY2EP-203ENST00000531117 1918 ntBASIC6.45□□□□□ -1.38
USH2AO75445 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC6.45□□□□□ -1.38
USH2AO75445 MAP1LC3BP1-202ENST00000438342 516 ntTSL 3 BASIC6.45□□□□□ -1.38
USH2AO75445 PEBP1P3-201ENST00000455475 548 ntBASIC6.45□□□□□ -1.38
USH2AO75445 RN7SL523P-201ENST00000484401 298 ntBASIC6.45□□□□□ -1.38
USH2AO75445 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
USH2AO75445 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC6.45□□□□□ -1.38
USH2AO75445 SRP14-208ENST00000560773 468 ntTSL 3 BASIC6.45□□□□□ -1.38
USH2AO75445 ABCD1P3-201ENST00000562927 605 ntBASIC6.45□□□□□ -1.38
USH2AO75445 AC073869.4-201ENST00000620841 800 ntBASIC6.45□□□□□ -1.38
USH2AO75445 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC6.45□□□□□ -1.38
USH2AO75445 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC6.45□□□□□ -1.38
USH2AO75445 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC6.45□□□□□ -1.38
USH2AO75445 LINC01002-223ENST00000633179 407 ntTSL 5 BASIC6.45□□□□□ -1.38
USH2AO75445 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
USH2AO75445 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
USH2AO75445 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC6.45□□□□□ -1.38
USH2AO75445 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
USH2AO75445 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
USH2AO75445 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
USH2AO75445 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
USH2AO75445 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
USH2AO75445 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
USH2AO75445 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
USH2AO75445 U73169.1-201ENST00000395152 367 ntBASIC6.45□□□□□ -1.38
USH2AO75445 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC6.45□□□□□ -1.38
USH2AO75445 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC6.45□□□□□ -1.38
USH2AO75445 CRIP1P2-201ENST00000425396 228 ntBASIC6.45□□□□□ -1.38
USH2AO75445 AL049542.1-201ENST00000430231 278 ntBASIC6.45□□□□□ -1.38
USH2AO75445 AC005722.1-201ENST00000431878 964 ntBASIC6.45□□□□□ -1.38
USH2AO75445 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC6.45□□□□□ -1.38
USH2AO75445 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC6.45□□□□□ -1.38
USH2AO75445 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC6.45□□□□□ -1.38
USH2AO75445 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC6.45□□□□□ -1.38
USH2AO75445 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
USH2AO75445 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
USH2AO75445 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
USH2AO75445 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
USH2AO75445 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
USH2AO75445 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
USH2AO75445 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC6.45□□□□□ -1.38
USH2AO75445 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC6.45□□□□□ -1.38
USH2AO75445 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
USH2AO75445 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
USH2AO75445 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC6.45□□□□□ -1.38
USH2AO75445 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
USH2AO75445 C6orf203-201ENST00000311381 900 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
USH2AO75445 VSTM1-205ENST00000425006 608 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
USH2AO75445 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
USH2AO75445 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC6.45□□□□□ -1.38
USH2AO75445 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC6.45□□□□□ -1.38
USH2AO75445 KRT8P2-201ENST00000556193 944 ntBASIC6.45□□□□□ -1.38
USH2AO75445 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC6.45□□□□□ -1.38
USH2AO75445 AC026336.4-201ENST00000624565 1050 ntBASIC6.45□□□□□ -1.38
USH2AO75445 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC6.45□□□□□ -1.38
USH2AO75445 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
USH2AO75445 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
USH2AO75445 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
USH2AO75445 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
USH2AO75445 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
USH2AO75445 AC007952.5-201ENST00000572818 1486 ntBASIC6.45□□□□□ -1.38
USH2AO75445 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
USH2AO75445 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
USH2AO75445 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
USH2AO75445 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
USH2AO75445 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USH2AO75445 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC6.44□□□□□ -1.38
USH2AO75445 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC6.44□□□□□ -1.38
USH2AO75445 AP000354.1-201ENST00000396982 456 ntBASIC6.44□□□□□ -1.38
USH2AO75445 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC6.44□□□□□ -1.38
USH2AO75445 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC6.44□□□□□ -1.38
USH2AO75445 AC079325.1-201ENST00000430386 857 ntBASIC6.44□□□□□ -1.38
USH2AO75445 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC6.44□□□□□ -1.38
USH2AO75445 SNRPD2P2-201ENST00000473818 333 ntBASIC6.44□□□□□ -1.38
USH2AO75445 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC6.44□□□□□ -1.38
USH2AO75445 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC6.44□□□□□ -1.38
USH2AO75445 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC6.44□□□□□ -1.38
USH2AO75445 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC6.44□□□□□ -1.38
USH2AO75445 RN7SL202P-201ENST00000584410 262 ntBASIC6.44□□□□□ -1.38
USH2AO75445 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC6.44□□□□□ -1.38
USH2AO75445 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC6.44□□□□□ -1.38
USH2AO75445 AC009041.4-201ENST00000620075 638 ntBASIC6.44□□□□□ -1.38
USH2AO75445 AC134878.2-201ENST00000620700 1265 ntBASIC6.44□□□□□ -1.38
USH2AO75445 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms