Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.71■□□□□ 0.1
OPHN1O60890 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
OPHN1O60890 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
OPHN1O60890 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
OPHN1O60890 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
OPHN1O60890 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
OPHN1O60890 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
OPHN1O60890 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.7■□□□□ 0.1
OPHN1O60890 AL390755.1-201ENST00000623716 2027 ntBASIC15.7■□□□□ 0.1
OPHN1O60890 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.7■□□□□ 0.1
OPHN1O60890 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
OPHN1O60890 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.7■□□□□ 0.1
OPHN1O60890 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
OPHN1O60890 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
OPHN1O60890 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
OPHN1O60890 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
OPHN1O60890 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
OPHN1O60890 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
OPHN1O60890 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.7■□□□□ 0.1
OPHN1O60890 CSF2RBP1-201ENST00000447905 391 ntBASIC15.7■□□□□ 0.1
OPHN1O60890 FO681548.1-201ENST00000455617 1132 ntBASIC15.7■□□□□ 0.1
OPHN1O60890 PFN1P12-201ENST00000455938 534 ntBASIC15.7■□□□□ 0.1
OPHN1O60890 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
OPHN1O60890 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.7■□□□□ 0.1
OPHN1O60890 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
OPHN1O60890 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
OPHN1O60890 MIR5189-201ENST00000577370 114 ntBASIC15.7■□□□□ 0.1
OPHN1O60890 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.7■□□□□ 0.1
OPHN1O60890 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.7■□□□□ 0.1
OPHN1O60890 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
OPHN1O60890 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
OPHN1O60890 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
OPHN1O60890 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
OPHN1O60890 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
OPHN1O60890 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
OPHN1O60890 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
OPHN1O60890 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
OPHN1O60890 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
OPHN1O60890 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.7■□□□□ 0.1
OPHN1O60890 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.69■□□□□ 0.1
OPHN1O60890 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
OPHN1O60890 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.69■□□□□ 0.1
OPHN1O60890 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
OPHN1O60890 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
OPHN1O60890 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
OPHN1O60890 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
OPHN1O60890 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
OPHN1O60890 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.69■□□□□ 0.1
OPHN1O60890 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
OPHN1O60890 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.69■□□□□ 0.1
OPHN1O60890 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
OPHN1O60890 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
OPHN1O60890 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
OPHN1O60890 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.69■□□□□ 0.1
OPHN1O60890 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
OPHN1O60890 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
OPHN1O60890 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
OPHN1O60890 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
OPHN1O60890 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.69■□□□□ 0.1
OPHN1O60890 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.69■□□□□ 0.1
OPHN1O60890 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.69■□□□□ 0.1
OPHN1O60890 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.69■□□□□ 0.1
OPHN1O60890 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
OPHN1O60890 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.69■□□□□ 0.1
OPHN1O60890 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.69■□□□□ 0.1
OPHN1O60890 AC004066.1-201ENST00000502488 802 ntBASIC15.69■□□□□ 0.1
OPHN1O60890 GAPDHP40-201ENST00000505218 1006 ntBASIC15.69■□□□□ 0.1
OPHN1O60890 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.69■□□□□ 0.1
OPHN1O60890 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.69■□□□□ 0.1
OPHN1O60890 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
OPHN1O60890 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
OPHN1O60890 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.69■□□□□ 0.1
OPHN1O60890 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.69■□□□□ 0.1
OPHN1O60890 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
OPHN1O60890 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
OPHN1O60890 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.69■□□□□ 0.1
OPHN1O60890 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
OPHN1O60890 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
OPHN1O60890 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
OPHN1O60890 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.69■□□□□ 0.1
OPHN1O60890 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
OPHN1O60890 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
OPHN1O60890 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
OPHN1O60890 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
OPHN1O60890 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
OPHN1O60890 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
OPHN1O60890 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
OPHN1O60890 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
OPHN1O60890 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
OPHN1O60890 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.69■□□□□ 0.1
OPHN1O60890 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.69■□□□□ 0.1
OPHN1O60890 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
OPHN1O60890 AC007686.3-201ENST00000619017 3487 ntBASIC15.69■□□□□ 0.1
OPHN1O60890 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
OPHN1O60890 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC15.68■□□□□ 0.1
OPHN1O60890 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
OPHN1O60890 ADAMTS7P1-201ENST00000613213 4793 ntBASIC15.68■□□□□ 0.1
OPHN1O60890 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
OPHN1O60890 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
OPHN1O60890 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms