Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HCN1O60741 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HCN1O60741 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HCN1O60741 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HCN1O60741 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
HCN1O60741 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HCN1O60741 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HCN1O60741 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HCN1O60741 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HCN1O60741 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
HCN1O60741 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HCN1O60741 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HCN1O60741 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
HCN1O60741 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
HCN1O60741 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HCN1O60741 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HCN1O60741 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
HCN1O60741 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HCN1O60741 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HCN1O60741 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HCN1O60741 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.07□□□□□ -0.16
HCN1O60741 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.07□□□□□ -0.16
HCN1O60741 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.07□□□□□ -0.16
HCN1O60741 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HCN1O60741 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.07□□□□□ -0.16
HCN1O60741 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.07□□□□□ -0.16
HCN1O60741 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
HCN1O60741 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.07□□□□□ -0.16
HCN1O60741 AP001063.1-201ENST00000568332 529 ntBASIC14.07□□□□□ -0.16
HCN1O60741 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
HCN1O60741 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.07□□□□□ -0.16
HCN1O60741 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.07□□□□□ -0.16
HCN1O60741 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
HCN1O60741 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HCN1O60741 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HCN1O60741 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HCN1O60741 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.07□□□□□ -0.16
HCN1O60741 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.07□□□□□ -0.16
HCN1O60741 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HCN1O60741 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HCN1O60741 BEND3P1-201ENST00000421591 1944 ntBASIC14.07□□□□□ -0.16
HCN1O60741 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.07□□□□□ -0.16
HCN1O60741 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
HCN1O60741 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HCN1O60741 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HCN1O60741 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.07□□□□□ -0.16
HCN1O60741 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.07□□□□□ -0.16
HCN1O60741 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HCN1O60741 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
HCN1O60741 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HCN1O60741 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HCN1O60741 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
HCN1O60741 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.06□□□□□ -0.16
HCN1O60741 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.06□□□□□ -0.16
HCN1O60741 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.06□□□□□ -0.16
HCN1O60741 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HCN1O60741 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HCN1O60741 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
HCN1O60741 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
HCN1O60741 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
HCN1O60741 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
HCN1O60741 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.06□□□□□ -0.16
HCN1O60741 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HCN1O60741 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.06□□□□□ -0.16
HCN1O60741 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HCN1O60741 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.06□□□□□ -0.16
HCN1O60741 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HCN1O60741 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
HCN1O60741 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
HCN1O60741 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.06□□□□□ -0.16
HCN1O60741 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.06□□□□□ -0.16
HCN1O60741 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HCN1O60741 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
HCN1O60741 AC022210.1-201ENST00000449856 793 ntBASIC14.06□□□□□ -0.16
HCN1O60741 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
HCN1O60741 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HCN1O60741 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.06□□□□□ -0.16
HCN1O60741 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.06□□□□□ -0.16
HCN1O60741 AP005482.1-201ENST00000563722 1273 ntBASIC14.06□□□□□ -0.16
HCN1O60741 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.06□□□□□ -0.16
HCN1O60741 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.06□□□□□ -0.16
HCN1O60741 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HCN1O60741 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
HCN1O60741 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.06□□□□□ -0.16
HCN1O60741 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.06□□□□□ -0.16
HCN1O60741 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
HCN1O60741 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HCN1O60741 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.06□□□□□ -0.16
HCN1O60741 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.06□□□□□ -0.16
HCN1O60741 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.06□□□□□ -0.16
HCN1O60741 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HCN1O60741 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HCN1O60741 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HCN1O60741 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.06□□□□□ -0.16
HCN1O60741 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
HCN1O60741 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
HCN1O60741 DRD5P1-201ENST00000456605 1438 ntBASIC14.06□□□□□ -0.16
HCN1O60741 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
HCN1O60741 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HCN1O60741 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms