Protein–RNA interactions for Protein: O60488

ACSL4, Long-chain-fatty-acid--CoA ligase 4, humanhuman

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACSL4O60488 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.35■□□□□ 0.05
ACSL4O60488 MIR4525-201ENST00000580000 75 ntBASIC15.35■□□□□ 0.05
ACSL4O60488 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
ACSL4O60488 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.35■□□□□ 0.05
ACSL4O60488 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.35■□□□□ 0.05
ACSL4O60488 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ACSL4O60488 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ACSL4O60488 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.35■□□□□ 0.05
ACSL4O60488 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.35■□□□□ 0.05
ACSL4O60488 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ACSL4O60488 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ACSL4O60488 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ACSL4O60488 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ACSL4O60488 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ACSL4O60488 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ACSL4O60488 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
ACSL4O60488 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ACSL4O60488 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ACSL4O60488 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ACSL4O60488 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
ACSL4O60488 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.34■□□□□ 0.05
ACSL4O60488 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
ACSL4O60488 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL4O60488 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
ACSL4O60488 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
ACSL4O60488 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
ACSL4O60488 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.34■□□□□ 0.05
ACSL4O60488 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL4O60488 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL4O60488 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.34■□□□□ 0.05
ACSL4O60488 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL4O60488 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL4O60488 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL4O60488 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL4O60488 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL4O60488 PCDHA3-202ENST00000532566 4594 ntBASIC15.34■□□□□ 0.05
ACSL4O60488 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.34■□□□□ 0.05
ACSL4O60488 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.34■□□□□ 0.05
ACSL4O60488 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL4O60488 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL4O60488 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.34■□□□□ 0.05
ACSL4O60488 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.34■□□□□ 0.05
ACSL4O60488 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL4O60488 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL4O60488 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.34■□□□□ 0.05
ACSL4O60488 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.34■□□□□ 0.05
ACSL4O60488 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL4O60488 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
ACSL4O60488 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
ACSL4O60488 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL4O60488 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
ACSL4O60488 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.34■□□□□ 0.05
ACSL4O60488 AL008638.5-201ENST00000623814 1298 ntBASIC15.34■□□□□ 0.05
ACSL4O60488 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
ACSL4O60488 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
ACSL4O60488 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.34■□□□□ 0.05
ACSL4O60488 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL4O60488 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL4O60488 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL4O60488 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL4O60488 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.34■□□□□ 0.05
ACSL4O60488 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
ACSL4O60488 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL4O60488 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.34■□□□□ 0.05
ACSL4O60488 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL4O60488 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL4O60488 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ACSL4O60488 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.34■□□□□ 0.05
ACSL4O60488 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.34■□□□□ 0.05
ACSL4O60488 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
ACSL4O60488 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
ACSL4O60488 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ACSL4O60488 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.33■□□□□ 0.05
ACSL4O60488 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ACSL4O60488 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
ACSL4O60488 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
ACSL4O60488 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ACSL4O60488 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
ACSL4O60488 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.05
ACSL4O60488 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ACSL4O60488 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.33■□□□□ 0.04
ACSL4O60488 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
ACSL4O60488 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ACSL4O60488 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ACSL4O60488 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ACSL4O60488 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
ACSL4O60488 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ACSL4O60488 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.33■□□□□ 0.04
ACSL4O60488 AC006033.1-201ENST00000440505 426 ntBASIC15.33■□□□□ 0.04
ACSL4O60488 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.33■□□□□ 0.04
ACSL4O60488 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ACSL4O60488 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.33■□□□□ 0.04
ACSL4O60488 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.33■□□□□ 0.04
ACSL4O60488 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.33■□□□□ 0.04
ACSL4O60488 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ACSL4O60488 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.33■□□□□ 0.04
ACSL4O60488 DUX4L46-201ENST00000566845 751 ntBASIC15.33■□□□□ 0.04
ACSL4O60488 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.33■□□□□ 0.04
ACSL4O60488 MIR4783-201ENST00000580343 82 ntBASIC15.33■□□□□ 0.04
ACSL4O60488 AL022328.3-201ENST00000607943 679 ntBASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms