Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 RNA5SP412-201ENST00000516234 123 ntBASIC16.18■□□□□ 0.18
EXTL3O43909 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.18■□□□□ 0.18
EXTL3O43909 AL583810.1-201ENST00000553344 1045 ntBASIC16.18■□□□□ 0.18
EXTL3O43909 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
EXTL3O43909 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.18■□□□□ 0.18
EXTL3O43909 RN7SL219P-201ENST00000582872 296 ntBASIC16.18■□□□□ 0.18
EXTL3O43909 AC084346.2-201ENST00000607097 949 ntBASIC16.18■□□□□ 0.18
EXTL3O43909 AL358472.3-201ENST00000608147 415 ntBASIC16.18■□□□□ 0.18
EXTL3O43909 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
EXTL3O43909 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
EXTL3O43909 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
EXTL3O43909 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EXTL3O43909 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
EXTL3O43909 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
EXTL3O43909 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.18■□□□□ 0.18
EXTL3O43909 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EXTL3O43909 AL354702.1-201ENST00000442006 1960 ntBASIC16.18■□□□□ 0.18
EXTL3O43909 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.18■□□□□ 0.18
EXTL3O43909 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
EXTL3O43909 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
EXTL3O43909 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EXTL3O43909 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.18■□□□□ 0.18
EXTL3O43909 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EXTL3O43909 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EXTL3O43909 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EXTL3O43909 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
EXTL3O43909 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
EXTL3O43909 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EXTL3O43909 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EXTL3O43909 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EXTL3O43909 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EXTL3O43909 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EXTL3O43909 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EXTL3O43909 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EXTL3O43909 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EXTL3O43909 MIR1908-201ENST00000410394 80 ntBASIC16.17■□□□□ 0.18
EXTL3O43909 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
EXTL3O43909 FAM21FP-201ENST00000426241 1131 ntBASIC16.17■□□□□ 0.18
EXTL3O43909 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
EXTL3O43909 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.17■□□□□ 0.18
EXTL3O43909 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EXTL3O43909 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EXTL3O43909 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EXTL3O43909 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EXTL3O43909 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EXTL3O43909 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EXTL3O43909 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EXTL3O43909 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
EXTL3O43909 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EXTL3O43909 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.17■□□□□ 0.18
EXTL3O43909 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EXTL3O43909 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
EXTL3O43909 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EXTL3O43909 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.17■□□□□ 0.18
EXTL3O43909 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EXTL3O43909 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
EXTL3O43909 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.16■□□□□ 0.18
EXTL3O43909 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EXTL3O43909 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
EXTL3O43909 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EXTL3O43909 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EXTL3O43909 AL133338.1-201ENST00000565695 1517 ntBASIC16.16■□□□□ 0.18
EXTL3O43909 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EXTL3O43909 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EXTL3O43909 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
EXTL3O43909 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EXTL3O43909 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EXTL3O43909 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.16■□□□□ 0.18
EXTL3O43909 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
EXTL3O43909 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
EXTL3O43909 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
EXTL3O43909 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
EXTL3O43909 HIST2H2BB-201ENST00000449108 381 ntBASIC16.16■□□□□ 0.18
EXTL3O43909 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.16■□□□□ 0.18
EXTL3O43909 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
EXTL3O43909 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
EXTL3O43909 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.16■□□□□ 0.18
EXTL3O43909 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.16■□□□□ 0.18
EXTL3O43909 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
EXTL3O43909 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.16■□□□□ 0.18
EXTL3O43909 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.16■□□□□ 0.18
EXTL3O43909 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.16■□□□□ 0.18
EXTL3O43909 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.16■□□□□ 0.18
EXTL3O43909 AP001002.3-201ENST00000623482 206 ntBASIC16.16■□□□□ 0.18
EXTL3O43909 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.16■□□□□ 0.18
EXTL3O43909 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.16■□□□□ 0.18
EXTL3O43909 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EXTL3O43909 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.16■□□□□ 0.18
EXTL3O43909 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
EXTL3O43909 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
EXTL3O43909 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
EXTL3O43909 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.16■□□□□ 0.18
EXTL3O43909 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
EXTL3O43909 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EXTL3O43909 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
EXTL3O43909 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EXTL3O43909 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EXTL3O43909 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.16■□□□□ 0.18
EXTL3O43909 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.16■□□□□ 0.18
EXTL3O43909 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms