Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 AC011840.2-201ENST00000563063 1520 ntBASIC13.34□□□□□ -0.27
TRAF3IP2O43734 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.27
TRAF3IP2O43734 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRAF3IP2O43734 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRAF3IP2O43734 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
TRAF3IP2O43734 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRAF3IP2O43734 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.33□□□□□ -0.27
TRAF3IP2O43734 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.27
TRAF3IP2O43734 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
TRAF3IP2O43734 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRAF3IP2O43734 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF3IP2O43734 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAF3IP2O43734 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.33□□□□□ -0.28
TRAF3IP2O43734 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF3IP2O43734 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAF3IP2O43734 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAF3IP2O43734 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
TRAF3IP2O43734 AL354702.1-201ENST00000442006 1960 ntBASIC13.33□□□□□ -0.28
TRAF3IP2O43734 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF3IP2O43734 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF3IP2O43734 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
TRAF3IP2O43734 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF3IP2O43734 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF3IP2O43734 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF3IP2O43734 KRT17P7-201ENST00000451704 1104 ntBASIC13.33□□□□□ -0.28
TRAF3IP2O43734 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF3IP2O43734 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAF3IP2O43734 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF3IP2O43734 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
TRAF3IP2O43734 CR383656.12-201ENST00000549567 513 ntBASIC13.33□□□□□ -0.28
TRAF3IP2O43734 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAF3IP2O43734 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAF3IP2O43734 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.33□□□□□ -0.28
TRAF3IP2O43734 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.33□□□□□ -0.28
TRAF3IP2O43734 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.33□□□□□ -0.28
TRAF3IP2O43734 AC132938.4-201ENST00000623835 848 ntBASIC13.33□□□□□ -0.28
TRAF3IP2O43734 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF3IP2O43734 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF3IP2O43734 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF3IP2O43734 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF3IP2O43734 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.33□□□□□ -0.28
TRAF3IP2O43734 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAF3IP2O43734 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF3IP2O43734 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAF3IP2O43734 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAF3IP2O43734 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF3IP2O43734 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 AC005912.2-201ENST00000619492 2400 ntBASIC13.32□□□□□ -0.28
TRAF3IP2O43734 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 C2orf27AP3-201ENST00000434123 579 ntBASIC13.32□□□□□ -0.28
TRAF3IP2O43734 AL590640.2-201ENST00000457038 527 ntBASIC13.32□□□□□ -0.28
TRAF3IP2O43734 FTH1P14-201ENST00000482930 551 ntBASIC13.32□□□□□ -0.28
TRAF3IP2O43734 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 AC131206.1-201ENST00000538078 1211 ntBASIC13.32□□□□□ -0.28
TRAF3IP2O43734 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 ECM1P1-201ENST00000604092 1279 ntBASIC13.32□□□□□ -0.28
TRAF3IP2O43734 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAF3IP2O43734 AL354718.3-201ENST00000616414 581 ntBASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms