Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 ARSEP1-201ENST00000420443 635 ntBASIC13.18□□□□□ -0.3
NPIPB4C9JG80 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 TTTY23B-201ENST00000442790 549 ntBASIC13.18□□□□□ -0.3
NPIPB4C9JG80 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 SORD2P-201ENST00000558556 1069 ntBASIC13.18□□□□□ -0.3
NPIPB4C9JG80 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 BTNL10-201ENST00000595971 695 ntBASIC13.18□□□□□ -0.3
NPIPB4C9JG80 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 OR2I1P-209ENST00000641730 5365 ntBASIC13.18□□□□□ -0.3
NPIPB4C9JG80 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 AC020910.5-201ENST00000623668 1865 ntBASIC13.18□□□□□ -0.3
NPIPB4C9JG80 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 AC020910.6-201ENST00000623084 1459 ntBASIC13.17□□□□□ -0.3
NPIPB4C9JG80 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 AL136379.1-201ENST00000623471 2642 ntBASIC13.17□□□□□ -0.3
NPIPB4C9JG80 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 AC009093.10-201ENST00000641956 1442 ntBASIC13.17□□□□□ -0.3
NPIPB4C9JG80 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 AL136309.1-201ENST00000403917 691 ntBASIC13.17□□□□□ -0.3
NPIPB4C9JG80 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 AC016694.1-201ENST00000434179 700 ntBASIC13.17□□□□□ -0.3
NPIPB4C9JG80 FAM8A4P-201ENST00000435433 1213 ntBASIC13.17□□□□□ -0.3
NPIPB4C9JG80 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 AL035414.1-201ENST00000451327 857 ntBASIC13.17□□□□□ -0.3
NPIPB4C9JG80 INE1-201ENST00000456273 945 ntBASIC13.17□□□□□ -0.3
NPIPB4C9JG80 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 KRT90P-201ENST00000549264 1064 ntBASIC13.17□□□□□ -0.3
NPIPB4C9JG80 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms