Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 AC018845.2-201ENST00000568326 409 ntBASIC10.52□□□□□ -0.73
LINC01546A6NGU7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 PRR29-207ENST00000580752 458 ntTSL 3 BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC10.52□□□□□ -0.73
LINC01546A6NGU7 MIR6069-201ENST00000620069 79 ntBASIC10.52□□□□□ -0.73
LINC01546A6NGU7 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 MRPL37P1-201ENST00000592451 1337 ntBASIC10.52□□□□□ -0.73
LINC01546A6NGU7 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 GOLGA2P5-201ENST00000266746 2395 ntBASIC10.52□□□□□ -0.73
LINC01546A6NGU7 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 AC026271.4-201ENST00000578214 1833 ntBASIC10.51□□□□□ -0.73
LINC01546A6NGU7 ABCD1P2-201ENST00000429313 1601 ntBASIC10.51□□□□□ -0.73
LINC01546A6NGU7 AC015688.4-201ENST00000580780 1647 ntBASIC10.51□□□□□ -0.73
LINC01546A6NGU7 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 AL118506.1-201ENST00000601296 3082 ntBASIC10.51□□□□□ -0.73
LINC01546A6NGU7 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 MPV17-208ENST00000405076 603 ntTSL 5 BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 IGHV3-22-201ENST00000520721 359 ntBASIC10.51□□□□□ -0.73
LINC01546A6NGU7 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 PRELID1P1-202ENST00000567272 903 ntBASIC10.51□□□□□ -0.73
LINC01546A6NGU7 LITAF-210ENST00000571976 548 ntTSL 2 BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 LITAF-214ENST00000574703 486 ntTSL 2 BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 KLK3-207ENST00000595952 969 ntTSL 3 BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 MIR7706-201ENST00000613747 67 ntBASIC10.51□□□□□ -0.73
LINC01546A6NGU7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 STK3-218ENST00000617590 2485 ntTSL 5 BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 AL136172.1-201ENST00000598590 1394 ntBASIC10.51□□□□□ -0.73
LINC01546A6NGU7 AL158070.2-201ENST00000623713 1621 ntBASIC10.51□□□□□ -0.73
LINC01546A6NGU7 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01546A6NGU7 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01546A6NGU7 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC10.5□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms