Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 NAP1L6-202ENST00000641404 1222 ntBASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3BA6NDS4 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 MBLAC2-202ENST00000514906 1936 ntBASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 AC006335.1-201ENST00000445200 547 ntBASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 HLA-J-204ENST00000495278 958 ntBASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 ALG3P1-201ENST00000508806 1114 ntBASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 AC090857.1-201ENST00000527400 390 ntBASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 AL160314.3-201ENST00000556041 767 ntBASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 RN7SL574P-201ENST00000581512 297 ntBASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 AC005962.1-201ENST00000584100 773 ntBASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 AL132994.2-201ENST00000603120 687 ntBASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 BX088702.1-201ENST00000610784 235 ntBASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 MIR6720-201ENST00000611664 98 ntBASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3BA6NDS4 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 AL162727.3-201ENST00000635661 2787 ntBASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 VDAC1P1-201ENST00000439229 848 ntBASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 RCC2P8-201ENST00000502779 1035 ntBASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 SCARNA21-201ENST00000517026 139 ntBASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms