Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.21□□□□□ -0.13
LRIT2A6NDA9 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LRIT2A6NDA9 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LRIT2A6NDA9 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
LRIT2A6NDA9 OR10B1P-201ENST00000601666 907 ntBASIC14.21□□□□□ -0.13
LRIT2A6NDA9 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRIT2A6NDA9 RHOXF1P1-202ENST00000635473 501 ntBASIC14.21□□□□□ -0.13
LRIT2A6NDA9 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRIT2A6NDA9 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
LRIT2A6NDA9 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LRIT2A6NDA9 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRIT2A6NDA9 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRIT2A6NDA9 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
LRIT2A6NDA9 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.21□□□□□ -0.14
LRIT2A6NDA9 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LRIT2A6NDA9 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.21□□□□□ -0.14
LRIT2A6NDA9 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LRIT2A6NDA9 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.21□□□□□ -0.14
LRIT2A6NDA9 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.21□□□□□ -0.14
LRIT2A6NDA9 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LRIT2A6NDA9 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
LRIT2A6NDA9 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LRIT2A6NDA9 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 RN7SKP175-201ENST00000408472 289 ntBASIC14.2□□□□□ -0.14
LRIT2A6NDA9 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 AC234783.1-201ENST00000441761 496 ntBASIC14.2□□□□□ -0.14
LRIT2A6NDA9 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 KLF2P4-201ENST00000451959 1225 ntBASIC14.2□□□□□ -0.14
LRIT2A6NDA9 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 BX088702.1-201ENST00000610784 235 ntBASIC14.2□□□□□ -0.14
LRIT2A6NDA9 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 AL354989.2-201ENST00000435838 1540 ntBASIC14.2□□□□□ -0.14
LRIT2A6NDA9 AC092135.3-201ENST00000624151 1846 ntBASIC14.2□□□□□ -0.14
LRIT2A6NDA9 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.2□□□□□ -0.14
LRIT2A6NDA9 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 AC009093.2-202ENST00000620513 2079 ntBASIC14.19□□□□□ -0.14
LRIT2A6NDA9 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 AHCYP2-201ENST00000430630 1300 ntBASIC14.19□□□□□ -0.14
LRIT2A6NDA9 MRPL37P1-201ENST00000592451 1337 ntBASIC14.19□□□□□ -0.14
LRIT2A6NDA9 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRIT2A6NDA9 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 294.6 ms