Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.03□□□□□ -0.32
SHISA3A0PJX4 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 RPL37AP1-201ENST00000412502 279 ntBASIC13.03□□□□□ -0.32
SHISA3A0PJX4 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 ALG1L5P-201ENST00000482043 771 ntBASIC13.03□□□□□ -0.32
SHISA3A0PJX4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.03□□□□□ -0.32
SHISA3A0PJX4 C20orf181-201ENST00000623918 480 ntBASIC13.03□□□□□ -0.32
SHISA3A0PJX4 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SHISA3A0PJX4 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.02□□□□□ -0.32
SHISA3A0PJX4 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.02□□□□□ -0.32
SHISA3A0PJX4 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
SHISA3A0PJX4 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.02□□□□□ -0.32
SHISA3A0PJX4 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.02□□□□□ -0.32
SHISA3A0PJX4 AL118506.1-201ENST00000601296 3082 ntBASIC13.02□□□□□ -0.32
SHISA3A0PJX4 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SHISA3A0PJX4 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SHISA3A0PJX4 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
SHISA3A0PJX4 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.02□□□□□ -0.32
SHISA3A0PJX4 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SHISA3A0PJX4 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SHISA3A0PJX4 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SHISA3A0PJX4 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.02□□□□□ -0.33
SHISA3A0PJX4 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SHISA3A0PJX4 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SHISA3A0PJX4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
SHISA3A0PJX4 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
SHISA3A0PJX4 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
SHISA3A0PJX4 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms