Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 TCAF1P1-201ENST00000414990 2232 ntBASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 NSL1-201ENST00000366976 722 ntTSL 2 BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 GLI4-203ENST00000517468 963 ntTSL 5 BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 API5-211ENST00000534695 560 ntTSL 5 BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 AC124283.3-201ENST00000570869 594 ntBASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 MIR8072-201ENST00000614241 80 ntBASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
HLA-DRB4X5D2U9 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 POLD4-211ENST00000539074 714 ntTSL 3 BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 AC190387.1-201ENST00000551683 408 ntBASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC11.34□□□□□ -0.59
HLA-DRB4X5D2U9 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms