Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 AC106881.1-201ENST00000605849 3329 ntBASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 AC025279.2-201ENST00000569730 653 ntBASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 AC023090.2-201ENST00000625182 2110 ntBASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 RETN-203ENST00000629642 400 ntTSL 5 BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 AC232323.1-201ENST00000540724 2099 ntBASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.97□□□□□ -0.01
PCDHB1Q9Y5F3 AC097376.2-205ENST00000610159 5334 ntBASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms