Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 PRR29-204ENST00000577953 565 ntTSL 4 BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 AC138969.3-201ENST00000546612 1459 ntBASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 AC138932.2-201ENST00000548268 1459 ntBASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 AC126755.4-201ENST00000549796 1459 ntBASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 AC022144.1-201ENST00000602255 1580 ntBASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC11.03□□□□□ -0.64
HHLA3Q9XRX5 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.64
HHLA3Q9XRX5 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC11.02□□□□□ -0.64
HHLA3Q9XRX5 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
HHLA3Q9XRX5 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
HHLA3Q9XRX5 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
HHLA3Q9XRX5 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
HHLA3Q9XRX5 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.64
HHLA3Q9XRX5 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
HHLA3Q9XRX5 AL591122.2-201ENST00000624125 1853 ntBASIC11.02□□□□□ -0.64
HHLA3Q9XRX5 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
HHLA3Q9XRX5 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
HHLA3Q9XRX5 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
HHLA3Q9XRX5 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 PKIG-203ENST00000372887 769 ntTSL 3 BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 TSSK5P-201ENST00000423978 907 ntBASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 INGX-202ENST00000489074 768 ntBASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 RAB35-202ENST00000534951 939 ntTSL 2 BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 AC135586.1-201ENST00000539323 574 ntBASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 LINC01115-203ENST00000606068 577 ntBASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
HHLA3Q9XRX5 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC11.01□□□□□ -0.65
HHLA3Q9XRX5 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC11.01□□□□□ -0.65
HHLA3Q9XRX5 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
HHLA3Q9XRX5 AC015802.1-201ENST00000588104 1449 ntBASIC11.01□□□□□ -0.65
HHLA3Q9XRX5 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC11.01□□□□□ -0.65
HHLA3Q9XRX5 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms