Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 PDIA3P1-201ENST00000471856 1510 ntBASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 AC079776.1-201ENST00000401540 1152 ntBASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 U91328.1-201ENST00000437528 223 ntBASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 C2orf69P2-201ENST00000562032 1123 ntBASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 AC073413.1-201ENST00000603927 732 ntBASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 MYADML-201ENST00000474610 2147 ntBASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 AL590440.2-201ENST00000641973 1595 ntBASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 AL009178.2-201ENST00000597278 2719 ntBASIC15.74■□□□□ 0.11
PCDHGC3Q9UN70 AL354989.2-201ENST00000435838 1540 ntBASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 PUDPP3-201ENST00000445368 636 ntBASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 COX5BP1-201ENST00000507622 393 ntBASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 KRT17P8-201ENST00000540749 863 ntBASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 AC139712.1-201ENST00000378256 1875 ntBASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 KC6-207ENST00000600644 2311 ntTSL 3 BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
PCDHGC3Q9UN70 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms