Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.78■□□□□ 0.44
CLIP2Q9UDT6 DUX4L47-201ENST00000566374 394 ntBASIC17.78■□□□□ 0.44
CLIP2Q9UDT6 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.78■□□□□ 0.44
CLIP2Q9UDT6 AC004466.1-201ENST00000599515 1080 ntBASIC17.78■□□□□ 0.44
CLIP2Q9UDT6 MIR6869-201ENST00000619434 62 ntBASIC17.78■□□□□ 0.44
CLIP2Q9UDT6 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC17.78■□□□□ 0.44
CLIP2Q9UDT6 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLIP2Q9UDT6 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC17.78■□□□□ 0.44
CLIP2Q9UDT6 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.78■□□□□ 0.44
CLIP2Q9UDT6 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLIP2Q9UDT6 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLIP2Q9UDT6 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.77■□□□□ 0.44
CLIP2Q9UDT6 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLIP2Q9UDT6 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CLIP2Q9UDT6 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLIP2Q9UDT6 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CLIP2Q9UDT6 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLIP2Q9UDT6 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLIP2Q9UDT6 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CLIP2Q9UDT6 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLIP2Q9UDT6 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLIP2Q9UDT6 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.77■□□□□ 0.44
CLIP2Q9UDT6 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC17.77■□□□□ 0.44
CLIP2Q9UDT6 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CLIP2Q9UDT6 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLIP2Q9UDT6 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLIP2Q9UDT6 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.77■□□□□ 0.44
CLIP2Q9UDT6 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CLIP2Q9UDT6 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.77■□□□□ 0.44
CLIP2Q9UDT6 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLIP2Q9UDT6 FAM8A4P-201ENST00000435433 1213 ntBASIC17.77■□□□□ 0.44
CLIP2Q9UDT6 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.77■□□□□ 0.44
CLIP2Q9UDT6 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.77■□□□□ 0.44
CLIP2Q9UDT6 AC108725.1-201ENST00000495472 409 ntBASIC17.77■□□□□ 0.44
CLIP2Q9UDT6 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.77■□□□□ 0.44
CLIP2Q9UDT6 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.77■□□□□ 0.44
CLIP2Q9UDT6 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.77■□□□□ 0.44
CLIP2Q9UDT6 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLIP2Q9UDT6 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.77■□□□□ 0.44
CLIP2Q9UDT6 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.77■□□□□ 0.44
CLIP2Q9UDT6 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLIP2Q9UDT6 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLIP2Q9UDT6 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC17.77■□□□□ 0.44
CLIP2Q9UDT6 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLIP2Q9UDT6 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLIP2Q9UDT6 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
CLIP2Q9UDT6 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CLIP2Q9UDT6 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLIP2Q9UDT6 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CLIP2Q9UDT6 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLIP2Q9UDT6 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLIP2Q9UDT6 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CLIP2Q9UDT6 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLIP2Q9UDT6 AC012508.2-201ENST00000567613 1472 ntBASIC17.76■□□□□ 0.43
CLIP2Q9UDT6 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC17.76■□□□□ 0.43
CLIP2Q9UDT6 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLIP2Q9UDT6 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLIP2Q9UDT6 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.76■□□□□ 0.43
CLIP2Q9UDT6 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC17.76■□□□□ 0.43
CLIP2Q9UDT6 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLIP2Q9UDT6 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLIP2Q9UDT6 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLIP2Q9UDT6 MIR326-201ENST00000362220 95 ntBASIC17.76■□□□□ 0.43
CLIP2Q9UDT6 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.76■□□□□ 0.43
CLIP2Q9UDT6 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CLIP2Q9UDT6 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.76■□□□□ 0.43
CLIP2Q9UDT6 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.76■□□□□ 0.43
CLIP2Q9UDT6 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.76■□□□□ 0.43
CLIP2Q9UDT6 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CLIP2Q9UDT6 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CLIP2Q9UDT6 AL603764.1-201ENST00000636452 321 ntBASIC17.76■□□□□ 0.43
CLIP2Q9UDT6 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC17.76■□□□□ 0.43
CLIP2Q9UDT6 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC17.76■□□□□ 0.43
CLIP2Q9UDT6 UCKL1-AS1-201ENST00000623569 3602 ntBASIC17.76■□□□□ 0.43
CLIP2Q9UDT6 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CLIP2Q9UDT6 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CLIP2Q9UDT6 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLIP2Q9UDT6 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CLIP2Q9UDT6 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CLIP2Q9UDT6 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLIP2Q9UDT6 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLIP2Q9UDT6 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLIP2Q9UDT6 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CLIP2Q9UDT6 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLIP2Q9UDT6 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC17.76■□□□□ 0.43
CLIP2Q9UDT6 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLIP2Q9UDT6 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLIP2Q9UDT6 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLIP2Q9UDT6 AL137783.1-201ENST00000623494 1896 ntBASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC17.75■□□□□ 0.43
CLIP2Q9UDT6 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms