Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20.94■□□□□ 0.94
SLC52A1Q9NWF4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SLC52A1Q9NWF4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC52A1Q9NWF4 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC20.94■□□□□ 0.94
SLC52A1Q9NWF4 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
SLC52A1Q9NWF4 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC20.94■□□□□ 0.94
SLC52A1Q9NWF4 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC52A1Q9NWF4 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
SLC52A1Q9NWF4 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC20.94■□□□□ 0.94
SLC52A1Q9NWF4 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC20.94■□□□□ 0.94
SLC52A1Q9NWF4 LTB4R2-202ENST00000528054 3092 ntBASIC20.93■□□□□ 0.94
SLC52A1Q9NWF4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC52A1Q9NWF4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC52A1Q9NWF4 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SLC52A1Q9NWF4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC52A1Q9NWF4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SLC52A1Q9NWF4 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC52A1Q9NWF4 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC20.93■□□□□ 0.94
SLC52A1Q9NWF4 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC20.93■□□□□ 0.94
SLC52A1Q9NWF4 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC20.93■□□□□ 0.94
SLC52A1Q9NWF4 CD164-210ENST00000512821 964 ntTSL 2 BASIC20.93■□□□□ 0.94
SLC52A1Q9NWF4 SIGLEC22P-201ENST00000599104 714 ntBASIC20.93■□□□□ 0.94
SLC52A1Q9NWF4 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC20.93■□□□□ 0.94
SLC52A1Q9NWF4 AC073592.2-201ENST00000623062 780 ntBASIC20.93■□□□□ 0.94
SLC52A1Q9NWF4 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC20.93■□□□□ 0.94
SLC52A1Q9NWF4 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC52A1Q9NWF4 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC20.93■□□□□ 0.94
SLC52A1Q9NWF4 CICP23-201ENST00000605013 2741 ntBASIC20.93■□□□□ 0.94
SLC52A1Q9NWF4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC52A1Q9NWF4 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC52A1Q9NWF4 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC52A1Q9NWF4 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC52A1Q9NWF4 AC006372.4-201ENST00000624122 1543 ntBASIC20.93■□□□□ 0.94
SLC52A1Q9NWF4 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SLC52A1Q9NWF4 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC52A1Q9NWF4 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC20.93■□□□□ 0.94
SLC52A1Q9NWF4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC52A1Q9NWF4 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SLC52A1Q9NWF4 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC20.92■□□□□ 0.94
SLC52A1Q9NWF4 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC20.92■□□□□ 0.94
SLC52A1Q9NWF4 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC20.92■□□□□ 0.94
SLC52A1Q9NWF4 ACE3P-201ENST00000423435 1973 ntBASIC20.92■□□□□ 0.94
SLC52A1Q9NWF4 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SLC52A1Q9NWF4 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC52A1Q9NWF4 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC52A1Q9NWF4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.92■□□□□ 0.94
SLC52A1Q9NWF4 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC52A1Q9NWF4 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SLC52A1Q9NWF4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC52A1Q9NWF4 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC52A1Q9NWF4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
SLC52A1Q9NWF4 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC52A1Q9NWF4 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC52A1Q9NWF4 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SLC52A1Q9NWF4 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC20.92■□□□□ 0.94
SLC52A1Q9NWF4 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC52A1Q9NWF4 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC20.92■□□□□ 0.94
SLC52A1Q9NWF4 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
SLC52A1Q9NWF4 RN7SL396P-201ENST00000471086 295 ntBASIC20.92■□□□□ 0.94
SLC52A1Q9NWF4 OR5BD1P-201ENST00000532527 817 ntBASIC20.92■□□□□ 0.94
SLC52A1Q9NWF4 RN7SL596P-201ENST00000582123 288 ntBASIC20.92■□□□□ 0.94
SLC52A1Q9NWF4 AL451007.2-201ENST00000632004 563 ntBASIC20.92■□□□□ 0.94
SLC52A1Q9NWF4 AC002472.4-201ENST00000641915 272 ntBASIC20.92■□□□□ 0.94
SLC52A1Q9NWF4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
SLC52A1Q9NWF4 TEKT4P2-202ENST00000559466 1312 ntBASIC20.92■□□□□ 0.94
SLC52A1Q9NWF4 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC20.92■□□□□ 0.94
SLC52A1Q9NWF4 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC52A1Q9NWF4 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC52A1Q9NWF4 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SLC52A1Q9NWF4 BRD7P5-201ENST00000299197 1822 ntBASIC20.92■□□□□ 0.94
SLC52A1Q9NWF4 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SLC52A1Q9NWF4 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SLC52A1Q9NWF4 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SLC52A1Q9NWF4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC20.91■□□□□ 0.94
SLC52A1Q9NWF4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
SLC52A1Q9NWF4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC20.91■□□□□ 0.94
SLC52A1Q9NWF4 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC52A1Q9NWF4 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC20.91■□□□□ 0.94
SLC52A1Q9NWF4 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SLC52A1Q9NWF4 RN7SKP109-201ENST00000410592 316 ntBASIC20.91■□□□□ 0.94
SLC52A1Q9NWF4 CELP-201ENST00000411440 1249 ntTSL 5 BASIC20.91■□□□□ 0.94
SLC52A1Q9NWF4 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC20.91■□□□□ 0.94
SLC52A1Q9NWF4 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC20.91■□□□□ 0.94
SLC52A1Q9NWF4 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SLC52A1Q9NWF4 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC20.91■□□□□ 0.94
SLC52A1Q9NWF4 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC52A1Q9NWF4 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC20.91■□□□□ 0.94
SLC52A1Q9NWF4 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC20.91■□□□□ 0.94
SLC52A1Q9NWF4 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC52A1Q9NWF4 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC20.91■□□□□ 0.94
SLC52A1Q9NWF4 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC20.91■□□□□ 0.94
SLC52A1Q9NWF4 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC20.91■□□□□ 0.94
SLC52A1Q9NWF4 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC20.91■□□□□ 0.94
SLC52A1Q9NWF4 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SLC52A1Q9NWF4 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC20.91■□□□□ 0.94
SLC52A1Q9NWF4 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC20.91■□□□□ 0.94
SLC52A1Q9NWF4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC52A1Q9NWF4 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC20.91■□□□□ 0.94
SLC52A1Q9NWF4 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC52A1Q9NWF4 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 868.6 ms