Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 TOMM22P5-201ENST00000416399 439 ntBASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 MEIS3P1-201ENST00000495167 958 ntBASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 TERF1P3-201ENST00000505638 1227 ntBASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 AC093004.1-201ENST00000508850 424 ntBASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 DOC2GP-202ENST00000514950 1163 ntBASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 LINC01115-203ENST00000606068 577 ntBASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 AC004233.3-201ENST00000607794 1269 ntBASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 AC008761.3-201ENST00000624803 892 ntBASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 AC097359.2-201ENST00000604992 2389 ntBASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 AC002472.2-201ENST00000442739 958 ntBASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 OARD1-208ENST00000469104 704 ntTSL 2 BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 GREM1-201ENST00000560677 623 ntTSL 4 BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 LINC02560-201ENST00000596379 459 ntBASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 AL359881.3-201ENST00000602640 1721 ntBASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.5□□□□□ -0.41
LIN7CQ9NUP9 AC092135.3-201ENST00000624151 1846 ntBASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms