Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
GCM1Q9NP62 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
GCM1Q9NP62 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
GCM1Q9NP62 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
GCM1Q9NP62 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GCM1Q9NP62 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
GCM1Q9NP62 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GCM1Q9NP62 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.85□□□□□ -0.35
GCM1Q9NP62 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
GCM1Q9NP62 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
GCM1Q9NP62 LBX2-201ENST00000341396 886 ntTSL 3 BASIC12.85□□□□□ -0.35
GCM1Q9NP62 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
GCM1Q9NP62 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
GCM1Q9NP62 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GCM1Q9NP62 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
GCM1Q9NP62 AC112492.5-201ENST00000421897 457 ntBASIC12.85□□□□□ -0.35
GCM1Q9NP62 GPR53P-205ENST00000457298 1084 ntBASIC12.85□□□□□ -0.35
GCM1Q9NP62 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC12.85□□□□□ -0.35
GCM1Q9NP62 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
GCM1Q9NP62 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC12.85□□□□□ -0.35
GCM1Q9NP62 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.85□□□□□ -0.35
GCM1Q9NP62 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.85□□□□□ -0.35
GCM1Q9NP62 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.85□□□□□ -0.35
GCM1Q9NP62 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.85□□□□□ -0.35
GCM1Q9NP62 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.85□□□□□ -0.35
GCM1Q9NP62 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.85□□□□□ -0.35
GCM1Q9NP62 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
GCM1Q9NP62 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
GCM1Q9NP62 PFAS-212ENST00000625942 396 ntTSL 5 BASIC12.85□□□□□ -0.35
GCM1Q9NP62 AL603764.1-201ENST00000636452 321 ntBASIC12.85□□□□□ -0.35
GCM1Q9NP62 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
GCM1Q9NP62 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GCM1Q9NP62 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.85□□□□□ -0.35
GCM1Q9NP62 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC12.85□□□□□ -0.35
GCM1Q9NP62 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GCM1Q9NP62 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.85□□□□□ -0.35
GCM1Q9NP62 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.85□□□□□ -0.35
GCM1Q9NP62 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
GCM1Q9NP62 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.85□□□□□ -0.35
GCM1Q9NP62 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.85□□□□□ -0.35
GCM1Q9NP62 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GCM1Q9NP62 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
GCM1Q9NP62 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GCM1Q9NP62 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
GCM1Q9NP62 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
GCM1Q9NP62 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.85□□□□□ -0.35
GCM1Q9NP62 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
GCM1Q9NP62 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
GCM1Q9NP62 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
GCM1Q9NP62 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
GCM1Q9NP62 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GCM1Q9NP62 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.85□□□□□ -0.35
GCM1Q9NP62 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
GCM1Q9NP62 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
GCM1Q9NP62 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC12.84□□□□□ -0.35
GCM1Q9NP62 AC099063.4-201ENST00000641099 1602 ntBASIC12.84□□□□□ -0.35
GCM1Q9NP62 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GCM1Q9NP62 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
GCM1Q9NP62 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
GCM1Q9NP62 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
GCM1Q9NP62 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GCM1Q9NP62 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GCM1Q9NP62 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
GCM1Q9NP62 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
GCM1Q9NP62 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
GCM1Q9NP62 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
GCM1Q9NP62 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
GCM1Q9NP62 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC12.84□□□□□ -0.35
GCM1Q9NP62 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GCM1Q9NP62 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.84□□□□□ -0.35
GCM1Q9NP62 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
GCM1Q9NP62 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.84□□□□□ -0.35
GCM1Q9NP62 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.84□□□□□ -0.35
GCM1Q9NP62 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
GCM1Q9NP62 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
GCM1Q9NP62 C2orf27AP3-201ENST00000434123 579 ntBASIC12.84□□□□□ -0.35
GCM1Q9NP62 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
GCM1Q9NP62 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC12.84□□□□□ -0.35
GCM1Q9NP62 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC12.84□□□□□ -0.35
GCM1Q9NP62 GNRHR2-203ENST00000581100 1187 ntBASIC12.84□□□□□ -0.35
GCM1Q9NP62 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.84□□□□□ -0.35
GCM1Q9NP62 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.84□□□□□ -0.35
GCM1Q9NP62 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC12.84□□□□□ -0.35
GCM1Q9NP62 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
GCM1Q9NP62 AL354718.3-201ENST00000616414 581 ntBASIC12.84□□□□□ -0.35
GCM1Q9NP62 CR382287.1-201ENST00000623954 586 ntBASIC12.84□□□□□ -0.35
GCM1Q9NP62 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
GCM1Q9NP62 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
GCM1Q9NP62 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
GCM1Q9NP62 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
GCM1Q9NP62 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GCM1Q9NP62 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
GCM1Q9NP62 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
GCM1Q9NP62 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GCM1Q9NP62 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
GCM1Q9NP62 AL137783.1-201ENST00000623494 1896 ntBASIC12.84□□□□□ -0.35
GCM1Q9NP62 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
GCM1Q9NP62 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
GCM1Q9NP62 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GCM1Q9NP62 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms