Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CD248Q9HCU0 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CD248Q9HCU0 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CD248Q9HCU0 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.85■□□□□ 0.13
CD248Q9HCU0 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CD248Q9HCU0 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CD248Q9HCU0 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.85■□□□□ 0.13
CD248Q9HCU0 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.85■□□□□ 0.13
CD248Q9HCU0 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.85■□□□□ 0.13
CD248Q9HCU0 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.85■□□□□ 0.13
CD248Q9HCU0 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.85■□□□□ 0.13
CD248Q9HCU0 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.85■□□□□ 0.13
CD248Q9HCU0 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD248Q9HCU0 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.85■□□□□ 0.13
CD248Q9HCU0 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.85■□□□□ 0.13
CD248Q9HCU0 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.85■□□□□ 0.13
CD248Q9HCU0 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD248Q9HCU0 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CD248Q9HCU0 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD248Q9HCU0 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD248Q9HCU0 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CD248Q9HCU0 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD248Q9HCU0 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CD248Q9HCU0 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD248Q9HCU0 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CD248Q9HCU0 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC15.85■□□□□ 0.13
CD248Q9HCU0 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CD248Q9HCU0 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CD248Q9HCU0 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CD248Q9HCU0 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.85■□□□□ 0.13
CD248Q9HCU0 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.85■□□□□ 0.13
CD248Q9HCU0 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.85■□□□□ 0.13
CD248Q9HCU0 AC148477.4-201ENST00000613430 1793 ntBASIC15.85■□□□□ 0.13
CD248Q9HCU0 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CD248Q9HCU0 AC136759.1-202ENST00000530858 2194 ntBASIC15.85■□□□□ 0.13
CD248Q9HCU0 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC15.85■□□□□ 0.13
CD248Q9HCU0 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CD248Q9HCU0 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD248Q9HCU0 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD248Q9HCU0 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD248Q9HCU0 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD248Q9HCU0 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD248Q9HCU0 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
CD248Q9HCU0 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CD248Q9HCU0 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.84■□□□□ 0.13
CD248Q9HCU0 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD248Q9HCU0 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD248Q9HCU0 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.84■□□□□ 0.13
CD248Q9HCU0 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD248Q9HCU0 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.84■□□□□ 0.13
CD248Q9HCU0 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.84■□□□□ 0.13
CD248Q9HCU0 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD248Q9HCU0 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.84■□□□□ 0.13
CD248Q9HCU0 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.84■□□□□ 0.13
CD248Q9HCU0 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.84■□□□□ 0.13
CD248Q9HCU0 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.84■□□□□ 0.13
CD248Q9HCU0 ACTBP11-201ENST00000436287 1126 ntBASIC15.84■□□□□ 0.13
CD248Q9HCU0 AC012441.1-201ENST00000446669 685 ntBASIC15.84■□□□□ 0.13
CD248Q9HCU0 CSF2RBP1-201ENST00000447905 391 ntBASIC15.84■□□□□ 0.13
CD248Q9HCU0 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.84■□□□□ 0.13
CD248Q9HCU0 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.84■□□□□ 0.13
CD248Q9HCU0 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CD248Q9HCU0 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CD248Q9HCU0 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
CD248Q9HCU0 AC026410.3-201ENST00000514280 936 ntBASIC15.84■□□□□ 0.13
CD248Q9HCU0 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.84■□□□□ 0.13
CD248Q9HCU0 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.84■□□□□ 0.13
CD248Q9HCU0 PTP4A1P2-201ENST00000546033 454 ntBASIC15.84■□□□□ 0.13
CD248Q9HCU0 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD248Q9HCU0 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.84■□□□□ 0.13
CD248Q9HCU0 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.84■□□□□ 0.13
CD248Q9HCU0 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.84■□□□□ 0.13
CD248Q9HCU0 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.84■□□□□ 0.13
CD248Q9HCU0 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.84■□□□□ 0.13
CD248Q9HCU0 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.84■□□□□ 0.13
CD248Q9HCU0 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.84■□□□□ 0.13
CD248Q9HCU0 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.84■□□□□ 0.13
CD248Q9HCU0 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CD248Q9HCU0 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
CD248Q9HCU0 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD248Q9HCU0 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD248Q9HCU0 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
CD248Q9HCU0 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD248Q9HCU0 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC15.84■□□□□ 0.13
CD248Q9HCU0 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CD248Q9HCU0 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
CD248Q9HCU0 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD248Q9HCU0 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD248Q9HCU0 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD248Q9HCU0 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CD248Q9HCU0 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CD248Q9HCU0 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
CD248Q9HCU0 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD248Q9HCU0 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CD248Q9HCU0 AC018892.3-201ENST00000623986 2499 ntBASIC15.84■□□□□ 0.13
CD248Q9HCU0 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.84■□□□□ 0.13
CD248Q9HCU0 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
CD248Q9HCU0 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CD248Q9HCU0 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CD248Q9HCU0 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.83■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms