Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CHD8Q9HCK8 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHD8Q9HCK8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHD8Q9HCK8 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHD8Q9HCK8 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CHD8Q9HCK8 GALP-202ENST00000440823 889 ntTSL 5 BASIC13.51□□□□□ -0.25
CHD8Q9HCK8 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC13.51□□□□□ -0.25
CHD8Q9HCK8 OR2A1-AS1-203ENST00000468575 568 ntBASIC13.51□□□□□ -0.25
CHD8Q9HCK8 RN7SL564P-201ENST00000496309 250 ntBASIC13.51□□□□□ -0.25
CHD8Q9HCK8 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC13.51□□□□□ -0.25
CHD8Q9HCK8 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHD8Q9HCK8 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHD8Q9HCK8 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHD8Q9HCK8 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHD8Q9HCK8 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHD8Q9HCK8 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.51□□□□□ -0.25
CHD8Q9HCK8 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC13.51□□□□□ -0.25
CHD8Q9HCK8 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.51□□□□□ -0.25
CHD8Q9HCK8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHD8Q9HCK8 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.51□□□□□ -0.25
CHD8Q9HCK8 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.51□□□□□ -0.25
CHD8Q9HCK8 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CHD8Q9HCK8 S100A7A-202ENST00000368728 440 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CHD8Q9HCK8 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC13.51□□□□□ -0.25
CHD8Q9HCK8 RPL18AP15-201ENST00000430258 517 ntBASIC13.51□□□□□ -0.25
CHD8Q9HCK8 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC13.51□□□□□ -0.25
CHD8Q9HCK8 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CHD8Q9HCK8 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CHD8Q9HCK8 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHD8Q9HCK8 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CHD8Q9HCK8 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHD8Q9HCK8 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
CHD8Q9HCK8 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CHD8Q9HCK8 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CHD8Q9HCK8 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHD8Q9HCK8 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHD8Q9HCK8 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CHD8Q9HCK8 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 RPL13AP3-202ENST00000494676 1473 ntBASIC13.5□□□□□ -0.25
CHD8Q9HCK8 FAM226B-201ENST00000602508 1490 ntBASIC13.5□□□□□ -0.25
CHD8Q9HCK8 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 GH1-203ENST00000351388 685 ntTSL 2 BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.5□□□□□ -0.25
CHD8Q9HCK8 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 RN7SL277P-201ENST00000481521 288 ntBASIC13.5□□□□□ -0.25
CHD8Q9HCK8 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 AL591424.3-201ENST00000614278 872 ntBASIC13.5□□□□□ -0.25
CHD8Q9HCK8 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 AGGF1P1-201ENST00000509500 2073 ntBASIC13.5□□□□□ -0.25
CHD8Q9HCK8 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 FAM21EP-201ENST00000417804 985 ntBASIC13.5□□□□□ -0.25
CHD8Q9HCK8 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 DLK1-205ENST00000556051 469 ntTSL 2 BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 CLPP-205ENST00000596605 646 ntTSL 2 BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 LINC00244-201ENST00000625073 613 ntBASIC13.5□□□□□ -0.25
CHD8Q9HCK8 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CHD8Q9HCK8 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 AC124067.4-201ENST00000519691 2379 ntBASIC13.49□□□□□ -0.25
CHD8Q9HCK8 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms